Gene name: SSZ1
Reference locus (S288C): YHR064C
Gene biotype: protein_coding
Description: Ribosome-associated complex subunit SSZ1; Hsp70 protein that interacts with Zuo1p (a DnaJ homolog); interacts with Zuo1p to form a ribosome-associated complex that binds the ribosome via the Zuo1p subunit; also involved in pleiotropic drug resistance via sequential activation of PDR1 and PDR5; binds ATP
Top 10 interactors (score): ZUO1 (0.999); YDJ1 (0.985); PDR1 (0.942); HSC82 (0.929); PAB1 (0.921); RPA135 (0.92); HSP104 (0.917); TIF3 (0.915); NOP7 (0.907); DBP3 (0.906); HSP82 (0.902); NCL1 (0.896); PDR5 (0.893); RRP12 (0.891); UTP21 (0.887); MDJ1 (0.885); SWA2 (0.86); PDR3 (0.86); SUP35 (0.858); FES1 (0.852)
Homologues (species, bitscore): HSPA6 (Homo sapiens, 213.4); Hspa8 (Mus musculus, 213.4); hsp70l (Danio rerio, 212.6); hsp70 (Xenopus tropicalis, 213.4); Hsp68 (Drosophila melanogaster, 222.6); hsp-70 (Caenorhabditis elegans, 214.5); Hsp70b (Arabidopsis thaliana, 211.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:211803-213419:- | gene-YHR064C_AKU4011 | rna-NM_001179194.1_AKU4011 | cds-NP_011931.2_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:132925-134541:- | gene-YHR064C_BG1 | rna-NM_001179194.1_BG1 | cds-NP_011931.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:219543-221159:- | gene-YHR064C_Bruggeman | rna-NM_001179194.1_Bruggeman | cds-NP_011931.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:214342-215958:- | gene-YHR064C_CAT1 | rna-NM_001179194.1_CAT1 | cds-NP_011931.2_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:210909-212525:- | gene-YHR064C_CBS1585 | rna-NM_001179194.1_CBS1585 | cds-NP_011931.2_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:208849-210465:- | gene-YHR064C_CBS436 | rna-NM_001179194.1_CBS436 | cds-NP_011931.2_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:211123-212739:- | gene-YHR064C_CBS6412 | rna-NM_001179194.1_CBS6412 | cds-NP_011931.2_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:211955-213571:- | gene-YHR064C_CBS6413 | rna-NM_001179194.1_CBS6413 | cds-NP_011931.2_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:218689-220305:- | gene-YHR064C_CENPK1137D | rna-NM_001179194.1_CENPK1137D | cds-NP_011931.2_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:211299-212915:- | gene-YHR064C_EthanolRed | rna-NM_001179194.1_EthanolRed | cds-NP_011931.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:212276-213892:- | gene-YHR064C_FaliES1 | rna-NM_001179194.1_FaliES1 | cds-NP_011931.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000280.1:3433-5049:+ | gene-YHR064C_JAY291 | rna-NM_001179194.1_JAY291 | cds-NP_011931.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:219295-220911:- | gene-YHR064C_MUCL30387 | rna-NM_001179194.1_MUCL30387 | cds-NP_011931.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:219180-220796:- | gene-YHR064C_MUCL30388 | rna-NM_001179194.1_MUCL30388 | cds-NP_011931.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:211176-212792:- | gene-YHR064C_MUCL39482 | rna-NM_001179194.1_MUCL39482 | cds-NP_011931.2_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:218085-219701:- | gene-YHR064C_MUCL42920 | rna-NM_001179194.1_MUCL42920 | cds-NP_011931.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:225407-227023:- | gene-YHR064C_NCIM3186 | rna-NM_001179194.1_NCIM3186 | cds-NP_011931.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:682817-684433:- | gene-YHR064C_NCYC1407 | rna-NM_001179194.1_NCYC1407 | cds-NP_011931.2_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:213380-214996:- | gene-YHR064C_PE2H3 | rna-NM_001179194.1_PE2H3 | cds-NP_011931.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:220827-222443:- | gene-YHR064C_PE2H4 | rna-NM_001179194.1_PE2H4 | cds-NP_011931.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:225525-227141:- | gene-YHR064C_S288C | rna-NM_001179194.1_S288C | cds-NP_011931.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:132281-133897:+ | gene-YHR064C_SA1 | rna-NM_001179194.1_SA1 | cds-NP_011931.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:213367-214983:- | gene-YHR064C_ThermosaccDry | rna-NM_001179194.1_ThermosaccDry | cds-NP_011931.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:220989-222605:- | gene-YHR064C_VR1 | rna-NM_001179194.1_VR1 | cds-NP_011931.2_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:204920-206536:- | gene-YHR064C_ZTW1 | rna-NM_001179194.1_ZTW1 | cds-NP_011931.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:210497-212113:- | gene-YHR064C_Sparadoxus | rna-NM_001179194.1_Sparadoxus | cds-NP_011931.2_Sparadoxus | 93.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |