Gene name: SSY1
Reference locus (S288C): YDR160W
Gene biotype: protein_coding
Description: SPS-sensor component SSY1; Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p
Top 10 interactors (score): PTR3 (0.998); SSY5 (0.996); STP1 (0.946); STP2 (0.933); GAP1 (0.846); ASI2 (0.816); ASI1 (0.813); ASI3 (0.813); YCK1 (0.801); AVT5 (0.795); PTR2 (0.794); SNF3 (0.774); RGT2 (0.767); MEP2 (0.755); GRR1 (0.712); MEP1 (0.703); SHR3 (0.701); MEP3 (0.7); GLN3 (0.58); DAL81 (0.574)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:747484-750042:+ | gene-YDR160W_AKU4011 | rna-NM_001180467.1_AKU4011 | cds-NP_010444.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:376712-379270:- | gene-YDR160W_BG1 | rna-NM_001180467.1_BG1 | cds-NP_010444.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:778982-781540:+ | gene-YDR160W_Bruggeman | rna-NM_001180467.1_Bruggeman | cds-NP_010444.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:766269-768827:+ | gene-YDR160W_CAT1 | rna-NM_001180467.1_CAT1 | cds-NP_010444.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:737852-740410:+ | gene-YDR160W_CBS1585 | rna-NM_001180467.1_CBS1585 | cds-NP_010444.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:764022-766580:+ | gene-YDR160W_CBS436 | rna-NM_001180467.1_CBS436 | cds-NP_010444.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:733334-735892:+ | gene-YDR160W_CBS6412 | rna-NM_001180467.1_CBS6412 | cds-NP_010444.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:761750-764308:+ | gene-YDR160W_CBS6413 | rna-NM_001180467.1_CBS6413 | cds-NP_010444.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:776851-779409:+ | gene-YDR160W_CENPK1137D | rna-NM_001180467.1_CENPK1137D | cds-NP_010444.1_CENPK1137D | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:747311-749869:+ | gene-YDR160W_EthanolRed | rna-NM_001180467.1_EthanolRed | cds-NP_010444.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:755523-758081:+ | gene-YDR160W_FaliES1 | rna-NM_001180467.1_FaliES1 | cds-NP_010444.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000401.1:16439-18997:+ | gene-YDR160W_JAY291 | rna-NM_001180467.1_JAY291 | cds-NP_010444.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:764360-766918:+ | gene-YDR160W_MUCL30387 | rna-NM_001180467.1_MUCL30387 | cds-NP_010444.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:752870-755428:+ | gene-YDR160W_MUCL30388 | rna-NM_001180467.1_MUCL30388 | cds-NP_010444.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:739279-741837:+ | gene-YDR160W_MUCL39482 | rna-NM_001180467.1_MUCL39482 | cds-NP_010444.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:677104-679662:+ | gene-YDR160W_MUCL42920 | rna-NM_001180467.1_MUCL42920 | cds-NP_010444.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:776086-778644:+ | gene-YDR160W_NCIM3186 | rna-NM_001180467.1_NCIM3186 | cds-NP_010444.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:738683-741241:+ | gene-YDR160W_NCYC1407 | rna-NM_001180467.1_NCYC1407 | cds-NP_010444.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:757872-760430:+ | gene-YDR160W_PE2H3 | rna-NM_001180467.1_PE2H3 | cds-NP_010444.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:757177-759735:+ | gene-YDR160W_PE2H4 | rna-NM_001180467.1_PE2H4 | cds-NP_010444.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:776163-778721:+ | gene-YDR160W_S288C | rna-NM_001180467.1_S288C | cds-NP_010444.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:123383-125941:+ | gene-YDR160W_SA1 | rna-NM_001180467.1_SA1 | cds-NP_010444.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:753658-756216:+ | gene-YDR160W_ThermosaccDry | rna-NM_001180467.1_ThermosaccDry | cds-NP_010444.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:768584-771142:+ | gene-YDR160W_VR1 | rna-NM_001180467.1_VR1 | cds-NP_010444.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:16410-18968:+ | gene-YDR160W_ZTW1 | rna-NM_001180467.1_ZTW1 | cds-NP_010444.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:759946-762504:+ | gene-YDR160W_Sparadoxus | rna-NM_001180467.1_Sparadoxus | cds-NP_010444.1_Sparadoxus | 90.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |