SSU1 (YPL092W)


Gene profile

Gene name: SSU1
Reference locus (S288C): YPL092W
Gene biotype: protein_coding

Description: Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein

Top 10 interactors (score): FZF1 (0.97); MET1 (0.903); ECM34 (0.899); YHB1 (0.752); YHL044W (0.695); YML020W (0.691); MET10 (0.676); VBA2 (0.663); MET3 (0.623); YBR287W (0.618); MET14 (0.615); MET16 (0.599); FMP23 (0.597); PUT2 (0.586); SUL2 (0.573); NOG1 (0.558); CSS1 (0.551); GRR1 (0.546); YPL278C (0.525); ALR2 (0.497)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:351435-352811:+ gene-YPL092W_AKU4011 rna-NM_001183906.1_AKU4011 cds-NP_015233.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:557191-558567:+ gene-YPL092W_BG1 rna-NM_001183906.1_BG1 cds-NP_015233.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:377442-378818:+ gene-YPL092W_Bruggeman rna-NM_001183906.1_Bruggeman cds-NP_015233.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:374906-376282:+ gene-YPL092W_CAT1 rna-NM_001183906.1_CAT1 cds-NP_015233.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:355510-356886:+ gene-YPL092W_CBS1585 rna-NM_001183906.1_CBS1585 cds-NP_015233.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:370181-371557:+ gene-YPL092W_CBS436 rna-NM_001183906.1_CBS436 cds-NP_015233.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:360178-361554:+ gene-YPL092W_CBS6412 rna-NM_001183906.1_CBS6412 cds-NP_015233.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:352144-353520:+ gene-YPL092W_CBS6413 rna-NM_001183906.1_CBS6413 cds-NP_015233.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:373741-375117:+ gene-YPL092W_CENPK1137D rna-NM_001183906.1_CENPK1137D cds-NP_015233.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:350127-351503:+ gene-YPL092W_EthanolRed rna-NM_001183906.1_EthanolRed cds-NP_015233.1_EthanolRed 99.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:357719-359095:+ gene-YPL092W_FaliES1 rna-NM_001183906.1_FaliES1 cds-NP_015233.1_FaliES1 99.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:6721-8097:- gene-YPL092W_JAY291 rna-NM_001183906.1_JAY291 cds-NP_015233.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:368680-370056:+ gene-YPL092W_MUCL30387 rna-NM_001183906.1_MUCL30387 cds-NP_015233.1_MUCL30387 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:593198-594574:+ gene-YPL092W_MUCL30388 rna-NM_001183906.1_MUCL30388 cds-NP_015233.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:348839-350215:+ gene-YPL092W_MUCL39482 rna-NM_001183906.1_MUCL39482 cds-NP_015233.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:406526-407902:+ gene-YPL092W_MUCL42920 rna-NM_001183906.1_MUCL42920 cds-NP_015233.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:373776-375152:+ gene-YPL092W_NCIM3186 rna-NM_001183906.1_NCIM3186 cds-NP_015233.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:355290-356666:+ gene-YPL092W_NCYC1407 rna-NM_001183906.1_NCYC1407 cds-NP_015233.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:362783-364159:+ gene-YPL092W_PE2H3 rna-NM_001183906.1_PE2H3 cds-NP_015233.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:362406-363782:+ gene-YPL092W_PE2H4 rna-NM_001183906.1_PE2H4 cds-NP_015233.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:373793-375169:+ gene-YPL092W_S288C rna-NM_001183906.1_S288C cds-NP_015233.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000138.1:2254-3630:- gene-YPL092W_SA1 rna-NM_001183906.1_SA1 cds-NP_015233.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:357517-358893:+ gene-YPL092W_ThermosaccDry rna-NM_001183906.1_ThermosaccDry cds-NP_015233.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:372494-373870:+ gene-YPL092W_VR1 rna-NM_001183906.1_VR1 cds-NP_015233.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:356837-358213:+ gene-YPL092W_ZTW1 rna-NM_001183906.1_ZTW1 cds-NP_015233.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:358483-359859:+ gene-YPL092W_Sparadoxus rna-NM_001183906.1_Sparadoxus cds-NP_015233.1_Sparadoxus 90.9 100.0 Verified 1 1 1 False True False False False

Additional files