Gene name: SSP2
Reference locus (S288C): YOR242C
Gene biotype: protein_coding
Description: Sporulation-specific protein 2; Sporulation specific protein that localizes to the spore wall; required for sporulation at a point after meiosis II and during spore wall formation; expression controlled by a tightly regulated middle-meiotic promoter that is activated by Ndt80p; translation of SSP2 mRNA is delayed, such that the mRNA is present as nuclear divisions are taking place but is not engaged by ribosomes until relatively late in meiotic development
Top 10 interactors (score): SMK1 (0.913); OSW1 (0.904); SPO74 (0.769); TOS2 (0.747); CLB3 (0.744); RIM4 (0.705); SPO14 (0.692); SSO1 (0.647); MFA2 (0.568); NDT80 (0.565); SLM5 (0.499); RTC4 (0.487); IME2 (0.487); SPA2 (0.485); CDC27 (0.467); DOC1 (0.463); FAR1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:779514-780629:- | gene-YOR242C_AKU4011 | rna-NM_001183661.3_AKU4011 | cds-NP_014885.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:181554-182669:- | gene-YOR242C_BG1 | rna-NM_001183661.3_BG1 | cds-NP_014885.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:764981-766096:- | gene-YOR242C_Bruggeman | rna-NM_001183661.3_Bruggeman | cds-NP_014885.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:765632-766747:- | gene-YOR242C_CAT1 | rna-NM_001183661.3_CAT1 | cds-NP_014885.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:762503-763618:- | gene-YOR242C_CBS1585 | rna-NM_001183661.3_CBS1585 | cds-NP_014885.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:761198-762313:- | gene-YOR242C_CBS436 | rna-NM_001183661.3_CBS436 | cds-NP_014885.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:759622-760737:- | gene-YOR242C_CBS6412 | rna-NM_001183661.3_CBS6412 | cds-NP_014885.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:768262-769377:- | gene-YOR242C_CBS6413 | rna-NM_001183661.3_CBS6413 | cds-NP_014885.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:788505-789620:- | gene-YOR242C_CENPK1137D | rna-NM_001183661.3_CENPK1137D | cds-NP_014885.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:755634-756749:- | gene-YOR242C_EthanolRed | rna-NM_001183661.3_EthanolRed | cds-NP_014885.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:761033-762148:- | gene-YOR242C_FaliES1 | rna-NM_001183661.3_FaliES1 | cds-NP_014885.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:64689-65804:+ | gene-YOR242C_JAY291 | rna-NM_001183661.3_JAY291 | cds-NP_014885.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:769252-770367:- | gene-YOR242C_MUCL30387 | rna-NM_001183661.3_MUCL30387 | cds-NP_014885.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:776370-777485:- | gene-YOR242C_MUCL30388 | rna-NM_001183661.3_MUCL30388 | cds-NP_014885.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:769833-770948:- | gene-YOR242C_MUCL39482 | rna-NM_001183661.3_MUCL39482 | cds-NP_014885.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:779422-780537:- | gene-YOR242C_MUCL42920 | rna-NM_001183661.3_MUCL42920 | cds-NP_014885.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:788631-789746:- | gene-YOR242C_NCIM3186 | rna-NM_001183661.3_NCIM3186 | cds-NP_014885.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:769932-771047:- | gene-YOR242C_NCYC1407 | rna-NM_001183661.3_NCYC1407 | cds-NP_014885.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:769234-770349:- | gene-YOR242C_PE2H3 | rna-NM_001183661.3_PE2H3 | cds-NP_014885.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:779611-780726:- | gene-YOR242C_PE2H4 | rna-NM_001183661.3_PE2H4 | cds-NP_014885.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:788742-789857:- | gene-YOR242C_S288C | rna-NM_001183661.3_S288C | cds-NP_014885.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:198735-199850:- | gene-YOR242C_SA1 | rna-NM_001183661.3_SA1 | cds-NP_014885.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:760216-761331:- | gene-YOR242C_ThermosaccDry | rna-NM_001183661.3_ThermosaccDry | cds-NP_014885.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:823674-824789:- | gene-YOR242C_VR1 | rna-NM_001183661.3_VR1 | cds-NP_014885.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:493132-494247:- | gene-YOR242C_ZTW1 | rna-NM_001183661.3_ZTW1 | cds-NP_014885.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:766124-767239:- | gene-YOR242C_Sparadoxus | rna-NM_001183661.3_Sparadoxus | cds-NP_014885.3_Sparadoxus | 88.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |