Gene name: SSP120
Reference locus (S288C): YLR250W
Gene biotype: protein_coding
Description: Protein ssp120; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern
Top 10 interactors (score): EMP47 (0.823); YET3 (0.822); EMP46 (0.793); SCJ1 (0.749); FPR2 (0.71); SLY41 (0.695); COY1 (0.65); ERV46 (0.627); MNN11 (0.618); GAS4 (0.613); YOS9 (0.602); SVP26 (0.597); ERV41 (0.576); GAS2 (0.575); LOA1 (0.573); GAS5 (0.572); PHO88 (0.569); MSC2 (0.538); CWH41 (0.532); LTP1 (0.532)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:594529-595233:+ | gene-YLR250W_AKU4011 | rna-NM_001182137.1_AKU4011 | cds-NP_013351.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:136668-137372:- | gene-YLR250W_BG1 | rna-NM_001182137.1_BG1 | cds-NP_013351.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:628763-629467:+ | gene-YLR250W_Bruggeman | rna-NM_001182137.1_Bruggeman | cds-NP_013351.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:627891-628595:+ | gene-YLR250W_CAT1 | rna-NM_001182137.1_CAT1 | cds-NP_013351.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:630024-630728:+ | gene-YLR250W_CBS1585 | rna-NM_001182137.1_CBS1585 | cds-NP_013351.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:614227-614931:+ | gene-YLR250W_CBS436 | rna-NM_001182137.1_CBS436 | cds-NP_013351.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:592999-593703:+ | gene-YLR250W_CBS6412 | rna-NM_001182137.1_CBS6412 | cds-NP_013351.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:630319-631023:+ | gene-YLR250W_CBS6413 | rna-NM_001182137.1_CBS6413 | cds-NP_013351.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:624958-625662:+ | gene-YLR250W_CENPK1137D | rna-NM_001182137.1_CENPK1137D | cds-NP_013351.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:588641-589345:+ | gene-YLR250W_EthanolRed | rna-NM_001182137.1_EthanolRed | cds-NP_013351.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:617478-618182:+ | gene-YLR250W_FaliES1 | rna-NM_001182137.1_FaliES1 | cds-NP_013351.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:41190-41894:- | gene-YLR250W_JAY291 | rna-NM_001182137.1_JAY291 | cds-NP_013351.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:629620-630324:+ | gene-YLR250W_MUCL30387 | rna-NM_001182137.1_MUCL30387 | cds-NP_013351.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:633747-634451:+ | gene-YLR250W_MUCL30388 | rna-NM_001182137.1_MUCL30388 | cds-NP_013351.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:631005-631709:+ | gene-YLR250W_MUCL39482 | rna-NM_001182137.1_MUCL39482 | cds-NP_013351.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:625762-626466:+ | gene-YLR250W_MUCL42920 | rna-NM_001182137.1_MUCL42920 | cds-NP_013351.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:640291-640995:+ | gene-YLR250W_NCIM3186 | rna-NM_001182137.1_NCIM3186 | cds-NP_013351.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:617991-618695:+ | gene-YLR250W_NCYC1407 | rna-NM_001182137.1_NCYC1407 | cds-NP_013351.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:621715-622419:+ | gene-YLR250W_PE2H3 | rna-NM_001182137.1_PE2H3 | cds-NP_013351.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:621459-622163:+ | gene-YLR250W_PE2H4 | rna-NM_001182137.1_PE2H4 | cds-NP_013351.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:640317-641021:+ | gene-YLR250W_S288C | rna-NM_001182137.1_S288C | cds-NP_013351.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:41443-42147:- | gene-YLR250W_SA1 | rna-NM_001182137.1_SA1 | cds-NP_013351.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:619487-620191:+ | gene-YLR250W_ThermosaccDry | rna-NM_001182137.1_ThermosaccDry | cds-NP_013351.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:630832-631536:+ | gene-YLR250W_VR1 | rna-NM_001182137.1_VR1 | cds-NP_013351.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:143803-144507:+ | gene-YLR250W_ZTW1 | rna-NM_001182137.1_ZTW1 | cds-NP_013351.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:605612-606316:+ | gene-YLR250W_Sparadoxus | rna-NM_001182137.1_Sparadoxus | cds-NP_013351.1_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |