Gene name: SSE2
Reference locus (S288C): YBR169C
Gene biotype: protein_coding
Description: Member of Hsp110 subclass of the heat shock protein 70 (HSP70) family; serves as nucleotide exchange factor to load ATP onto the SSA class of cytosolic Hsp70s; may be involved in protein folding; localized to the cytoplasm; SSE2 has a paralog, SSE1, that arose from the whole genome duplication
Top 10 interactors (score): SIS1 (0.998); STI1 (0.996); HSP104 (0.995); SGT2 (0.992); ZUO1 (0.991); HSP26 (0.989); HSP82 (0.989); MDJ1 (0.988); HSP42 (0.988); HSP78 (0.988); SSA4 (0.987); FES1 (0.987); YDJ1 (0.987); HSC82 (0.985); AHA1 (0.98); SNL1 (0.96); XDJ1 (0.959); SSE1 (0.959); CCT7 (0.956); CCT8 (0.956)
Homologues (species, bitscore): HSPH1 (Homo sapiens, 476.9); Hsph1 (Mus musculus, 474.2); hspa4a (Danio rerio, 494.2); hsph1 (Xenopus tropicalis, 460.3); Hsc70Cb (Drosophila melanogaster, 433.0); C30C11.4 (Caenorhabditis elegans, 438.0); HSP91 (Arabidopsis thaliana, 468.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:556788-558869:- | gene-YBR169C_AKU4011 | rna-NM_001178517.1_AKU4011 | cds-NP_009728.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:547298-549379:- | gene-YBR169C_BG1 | rna-NM_001178517.1_BG1 | cds-NP_009728.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:559809-561890:- | gene-YBR169C_Bruggeman | rna-NM_001178517.1_Bruggeman | cds-NP_009728.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:453925-456006:- | gene-YBR169C_CAT1 | rna-NM_001178517.1_CAT1 | cds-NP_009728.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:548570-550651:- | gene-YBR169C_CBS1585 | rna-NM_001178517.1_CBS1585 | cds-NP_009728.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:556652-558733:- | gene-YBR169C_CBS436 | rna-NM_001178517.1_CBS436 | cds-NP_009728.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:646054-648135:- | gene-YBR169C_CBS6412 | rna-NM_001178517.1_CBS6412 | cds-NP_009728.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:554125-556206:- | gene-YBR169C_CBS6413 | rna-NM_001178517.1_CBS6413 | cds-NP_009728.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:567715-569796:- | gene-YBR169C_CENPK1137D | rna-NM_001178517.1_CENPK1137D | cds-NP_009728.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:682633-684714:- | gene-YBR169C_EthanolRed | rna-NM_001178517.1_EthanolRed | cds-NP_009728.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:572865-574946:- | gene-YBR169C_FaliES1 | rna-NM_001178517.1_FaliES1 | cds-NP_009728.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:12696-14777:- | gene-YBR169C_JAY291 | rna-NM_001178517.1_JAY291 | cds-NP_009728.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:561462-563543:- | gene-YBR169C_MUCL30387 | rna-NM_001178517.1_MUCL30387 | cds-NP_009728.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:560748-562829:- | gene-YBR169C_MUCL30388 | rna-NM_001178517.1_MUCL30388 | cds-NP_009728.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:546943-549024:- | gene-YBR169C_MUCL39482 | rna-NM_001178517.1_MUCL39482 | cds-NP_009728.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:556864-558945:- | gene-YBR169C_MUCL42920 | rna-NM_001178517.1_MUCL42920 | cds-NP_009728.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:573712-575793:- | gene-YBR169C_NCIM3186 | rna-NM_001178517.1_NCIM3186 | cds-NP_009728.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:549512-551593:- | gene-YBR169C_NCYC1407 | rna-NM_001178517.1_NCYC1407 | cds-NP_009728.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:562170-564251:- | gene-YBR169C_PE2H3 | rna-NM_001178517.1_PE2H3 | cds-NP_009728.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:559846-561927:- | gene-YBR169C_PE2H4 | rna-NM_001178517.1_PE2H4 | cds-NP_009728.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:573915-575996:- | gene-YBR169C_S288C | rna-NM_001178517.1_S288C | cds-NP_009728.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:95162-97243:- | gene-YBR169C_SA1 | rna-NM_001178517.1_SA1 | cds-NP_009728.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:571875-573956:- | gene-YBR169C_ThermosaccDry | rna-NM_001178517.1_ThermosaccDry | cds-NP_009728.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:553321-555402:- | gene-YBR169C_VR1 | rna-NM_001178517.1_VR1 | cds-NP_009728.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:546990-549071:- | gene-YBR169C_ZTW1 | rna-NM_001178517.1_ZTW1 | cds-NP_009728.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:584355-586436:- | gene-YBR169C_Sparadoxus | rna-NM_001178517.1_Sparadoxus | cds-NP_009728.1_Sparadoxus | 88.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |