Gene name: SSE1
Reference locus (S288C): YPL106C
Gene biotype: protein_coding
Description: ATPase component of heat shock protein Hsp90 chaperone complex; serves as nucleotide exchange factor to load ATP onto the SSA class of cytosolic Hsp70s; plays a role in prion propagation and determining prion variants; binds unfolded proteins; member of Hsp110 subclass of HSP70 proteins; deletion results in spindle elongation in S phase; SSE1 has a paralog, SSE2, that arose from the whole genome duplication
Top 10 interactors (score): YDJ1 (0.999); HSC82 (0.999); SIS1 (0.999); STI1 (0.999); FES1 (0.998); HSP82 (0.997); ZUO1 (0.994); SGT2 (0.994); AHA1 (0.989); SSA1 (0.986); HSP104 (0.979); MDJ1 (0.975); XDJ1 (0.974); SBA1 (0.974); SNL1 (0.971); SSA2 (0.971); CCT8 (0.965); SSE2 (0.959); CCT7 (0.954); SUP35 (0.948)
Homologues (species, bitscore): HSPH1 (Homo sapiens, 477.2); Hsph1 (Mus musculus, 475.7); hspa4a (Danio rerio, 477.6); hsph1 (Xenopus tropicalis, 451.8); Hsc70Cb (Drosophila melanogaster, 435.3); C30C11.4 (Caenorhabditis elegans, 439.9); HSP91 (Arabidopsis thaliana, 482.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:327833-329914:- | gene-YPL106C_AKU4011 | rna-NM_001183920.1_AKU4011 | cds-NP_015219.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:533589-535670:- | gene-YPL106C_BG1 | rna-NM_001183920.1_BG1 | cds-NP_015219.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:353838-355919:- | gene-YPL106C_Bruggeman | rna-NM_001183920.1_Bruggeman | cds-NP_015219.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:350505-352586:- | gene-YPL106C_CAT1 | rna-NM_001183920.1_CAT1 | cds-NP_015219.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:331906-333987:- | gene-YPL106C_CBS1585 | rna-NM_001183920.1_CBS1585 | cds-NP_015219.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:346581-348662:- | gene-YPL106C_CBS436 | rna-NM_001183920.1_CBS436 | cds-NP_015219.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:336575-338656:- | gene-YPL106C_CBS6412 | rna-NM_001183920.1_CBS6412 | cds-NP_015219.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:328542-330623:- | gene-YPL106C_CBS6413 | rna-NM_001183920.1_CBS6413 | cds-NP_015219.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:350143-352224:- | gene-YPL106C_CENPK1137D | rna-NM_001183920.1_CENPK1137D | cds-NP_015219.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:326524-328605:- | gene-YPL106C_EthanolRed | rna-NM_001183920.1_EthanolRed | cds-NP_015219.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:334116-336197:- | gene-YPL106C_FaliES1 | rna-NM_001183920.1_FaliES1 | cds-NP_015219.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:29620-31701:+ | gene-YPL106C_JAY291 | rna-NM_001183920.1_JAY291 | cds-NP_015219.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:345078-347159:- | gene-YPL106C_MUCL30387 | rna-NM_001183920.1_MUCL30387 | cds-NP_015219.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:343896-345977:- | gene-YPL106C_MUCL30388 | rna-NM_001183920.1_MUCL30388 | cds-NP_015219.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:325235-327316:- | gene-YPL106C_MUCL39482 | rna-NM_001183920.1_MUCL39482 | cds-NP_015219.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:382923-385004:- | gene-YPL106C_MUCL42920 | rna-NM_001183920.1_MUCL42920 | cds-NP_015219.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:350177-352258:- | gene-YPL106C_NCIM3186 | rna-NM_001183920.1_NCIM3186 | cds-NP_015219.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:331688-333769:- | gene-YPL106C_NCYC1407 | rna-NM_001183920.1_NCYC1407 | cds-NP_015219.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:339180-341261:- | gene-YPL106C_PE2H3 | rna-NM_001183920.1_PE2H3 | cds-NP_015219.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:338803-340884:- | gene-YPL106C_PE2H4 | rna-NM_001183920.1_PE2H4 | cds-NP_015219.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:350194-352275:- | gene-YPL106C_S288C | rna-NM_001183920.1_S288C | cds-NP_015219.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:21405-23486:+ | gene-YPL106C_SA1 | rna-NM_001183920.1_SA1 | cds-NP_015219.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:333914-335995:- | gene-YPL106C_ThermosaccDry | rna-NM_001183920.1_ThermosaccDry | cds-NP_015219.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:348892-350973:- | gene-YPL106C_VR1 | rna-NM_001183920.1_VR1 | cds-NP_015219.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:333239-335320:- | gene-YPL106C_ZTW1 | rna-NM_001183920.1_ZTW1 | cds-NP_015219.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:334941-337022:- | gene-YPL106C_Sparadoxus | rna-NM_001183920.1_Sparadoxus | cds-NP_015219.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |