Gene name: SSA3
Reference locus (S288C): YBL075C
Gene biotype: protein_coding
Description: Heat shock protein SSA3; ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm; SSA3 has a paralog, SSA4, that arose from the whole genome duplication
Top 10 interactors (score): SSA4 (0.999); YDJ1 (0.997); SIS1 (0.995); HSP82 (0.992); STI1 (0.991); HSF1 (0.99); ZUO1 (0.987); HSC82 (0.987); HSP104 (0.969); XDJ1 (0.965); MDJ1 (0.963); APJ1 (0.948); SKN7 (0.942); HSP78 (0.942); EFM6 (0.928); HMS2 (0.926); MGA1 (0.926); NUP82 (0.925); SWA2 (0.918); NUP2 (0.914)
Homologues (species, bitscore): HSPA8 (Homo sapiens, 990.7); Hspa8 (Mus musculus, 990.3); hsc70 (Danio rerio, 991.1); hspa1b (Xenopus tropicalis, 1004.2); Hsc70-4 (Drosophila melanogaster, 991.1); hsp-1 (Caenorhabditis elegans, 1014.6); Hsp70b (Arabidopsis thaliana, 947.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:78056-80005:- | gene-YBL075C_AKU4011 | rna-NM_001178315.1_AKU4011 | cds-NP_009478.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:68943-70892:- | gene-YBL075C_BG1 | rna-NM_001178315.1_BG1 | cds-NP_009478.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:78668-80617:- | gene-YBL075C_Bruggeman | rna-NM_001178315.1_Bruggeman | cds-NP_009478.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:80618-82816:- | gene-YBL075C_CAT1 | rna-NM_001178315.1_CAT1 | cds-NP_009478.1_CAT1 | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:70155-72104:- | gene-YBL075C_CBS1585 | rna-NM_001178315.1_CBS1585 | cds-NP_009478.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:78908-80857:- | gene-YBL075C_CBS436 | rna-NM_001178315.1_CBS436 | cds-NP_009478.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:69548-71497:- | gene-YBL075C_CBS6412 | rna-NM_001178315.1_CBS6412 | cds-NP_009478.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:76203-78152:- | gene-YBL075C_CBS6413 | rna-NM_001178315.1_CBS6413 | cds-NP_009478.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:78152-80101:- | gene-YBL075C_CENPK1137D | rna-NM_001178315.1_CENPK1137D | cds-NP_009478.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:92308-94257:- | gene-YBL075C_EthanolRed | rna-NM_001178315.1_EthanolRed | cds-NP_009478.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:92437-94386:- | gene-YBL075C_FaliES1 | rna-NM_001178315.1_FaliES1 | cds-NP_009478.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000019.1:24316-26265:- | gene-YBL075C_JAY291 | rna-NM_001178315.1_JAY291 | cds-NP_009478.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:77796-79745:- | gene-YBL075C_MUCL30387 | rna-NM_001178315.1_MUCL30387 | cds-NP_009478.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:79323-81272:- | gene-YBL075C_MUCL30388 | rna-NM_001178315.1_MUCL30388 | cds-NP_009478.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:70336-72285:- | gene-YBL075C_MUCL39482 | rna-NM_001178315.1_MUCL39482 | cds-NP_009478.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:77168-79117:- | gene-YBL075C_MUCL42920 | rna-NM_001178315.1_MUCL42920 | cds-NP_009478.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:84296-86245:- | gene-YBL075C_NCIM3186 | rna-NM_001178315.1_NCIM3186 | cds-NP_009478.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:71946-73895:- | gene-YBL075C_NCYC1407 | rna-NM_001178315.1_NCYC1407 | cds-NP_009478.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:78232-80181:- | gene-YBL075C_PE2H3 | rna-NM_001178315.1_PE2H3 | cds-NP_009478.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:75876-77825:- | gene-YBL075C_PE2H4 | rna-NM_001178315.1_PE2H4 | cds-NP_009478.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:84499-86448:- | gene-YBL075C_S288C | rna-NM_001178315.1_S288C | cds-NP_009478.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:68609-70558:- | gene-YBL075C_SA1 | rna-NM_001178315.1_SA1 | cds-NP_009478.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:92398-94347:- | gene-YBL075C_ThermosaccDry | rna-NM_001178315.1_ThermosaccDry | cds-NP_009478.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:74566-76515:- | gene-YBL075C_VR1 | rna-NM_001178315.1_VR1 | cds-NP_009478.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:69616-71565:- | gene-YBL075C_ZTW1 | rna-NM_001178315.1_ZTW1 | cds-NP_009478.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:104323-106272:- | gene-YBL075C_Sparadoxus | rna-NM_001178315.1_Sparadoxus | cds-NP_009478.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |