Gene name: SRP68
Reference locus (S288C): YPL243W
Gene biotype: protein_coding
Description: Core component of the signal recognition particle (SRP) complex; SRP complex functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress; Belongs to the SRP68 family
Top 10 interactors (score): SRP54 (0.999); SRP14 (0.999); SRP72 (0.999); SEC65 (0.999); SRP21 (0.995); SRP102 (0.973); SRP101 (0.972); SRP1 (0.877); RPL5 (0.83); RPL25 (0.83); RPL39 (0.828); RPL30 (0.828); RPL28 (0.828); RPL3 (0.826); RPL38 (0.818); LHP1 (0.818); RPP0 (0.807); RPL29 (0.806); RPL24A (0.804); RPL24B (0.804)
Homologues (species, bitscore): SRP68 (Homo sapiens, 58.2); Srp68 (Mus musculus, 57.4); F55C5.8 (Caenorhabditis elegans, 52.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:66265-68064:+ | gene-YPL243W_AKU4011 | rna-NM_001184057.1_AKU4011 | cds-NP_015081.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000184.1:7079-8878:- | gene-YPL243W_BG1 | rna-NM_001184057.1_BG1 | cds-NP_015081.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:90149-91948:+ | gene-YPL243W_Bruggeman | rna-NM_001184057.1_Bruggeman | cds-NP_015081.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:88264-90063:+ | gene-YPL243W_CAT1 | rna-NM_001184057.1_CAT1 | cds-NP_015081.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:70578-72377:+ | gene-YPL243W_CBS1585 | rna-NM_001184057.1_CBS1585 | cds-NP_015081.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:84999-86798:+ | gene-YPL243W_CBS436 | rna-NM_001184057.1_CBS436 | cds-NP_015081.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:75742-77541:+ | gene-YPL243W_CBS6412 | rna-NM_001184057.1_CBS6412 | cds-NP_015081.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:66728-68527:+ | gene-YPL243W_CBS6413 | rna-NM_001184057.1_CBS6413 | cds-NP_015081.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:88452-90251:+ | gene-YPL243W_CENPK1137D | rna-NM_001184057.1_CENPK1137D | cds-NP_015081.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:65665-67464:+ | gene-YPL243W_EthanolRed | rna-NM_001184057.1_EthanolRed | cds-NP_015081.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:72472-74271:+ | gene-YPL243W_FaliES1 | rna-NM_001184057.1_FaliES1 | cds-NP_015081.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000264.1:6479-8278:- | gene-YPL243W_JAY291 | rna-NM_001184057.1_JAY291 | cds-NP_015081.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:83307-85106:+ | gene-YPL243W_MUCL30387 | rna-NM_001184057.1_MUCL30387 | cds-NP_015081.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:81750-83549:+ | gene-YPL243W_MUCL30388 | rna-NM_001184057.1_MUCL30388 | cds-NP_015081.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:63708-65507:+ | gene-YPL243W_MUCL39482 | rna-NM_001184057.1_MUCL39482 | cds-NP_015081.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:82576-84375:+ | gene-YPL243W_MUCL42920 | rna-NM_001184057.1_MUCL42920 | cds-NP_015081.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:88500-90299:+ | gene-YPL243W_NCIM3186 | rna-NM_001184057.1_NCIM3186 | cds-NP_015081.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:70155-71954:+ | gene-YPL243W_NCYC1407 | rna-NM_001184057.1_NCYC1407 | cds-NP_015081.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:77879-79678:+ | gene-YPL243W_PE2H3 | rna-NM_001184057.1_PE2H3 | cds-NP_015081.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:77522-79321:+ | gene-YPL243W_PE2H4 | rna-NM_001184057.1_PE2H4 | cds-NP_015081.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:88517-90316:+ | gene-YPL243W_S288C | rna-NM_001184057.1_S288C | cds-NP_015081.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:30395-32194:+ | gene-YPL243W_SA1 | rna-NM_001184057.1_SA1 | cds-NP_015081.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:72473-74272:+ | gene-YPL243W_ThermosaccDry | rna-NM_001184057.1_ThermosaccDry | cds-NP_015081.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:312348-314147:+ | gene-YPL243W_VR1 | rna-NM_001184057.1_VR1 | cds-NP_015081.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:72017-73816:+ | gene-YPL243W_ZTW1 | rna-NM_001184057.1_ZTW1 | cds-NP_015081.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:73574-75373:+ | gene-YPL243W_Sparadoxus | rna-NM_001184057.1_Sparadoxus | cds-NP_015081.1_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |