Gene name: SRP102
Reference locus (S288C): YKL154W
Gene biotype: protein_coding
Description: Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors the alpha subunit, Srp101p to the ER membrane
Top 10 interactors (score): SRP101 (0.999); SRP54 (0.985); MEC1 (0.98); SRP68 (0.973); SRP72 (0.971); SEC63 (0.945); SEC61 (0.927); SRP14 (0.914); SEC62 (0.901); SEC65 (0.885); SRP21 (0.836); SSS1 (0.827); OST2 (0.778); DAP2 (0.774); BMS1 (0.739); SEC72 (0.729); CGR1 (0.715); APM3 (0.706); BSC6 (0.692); EMP24 (0.685)
Homologues (species, bitscore): SRPRB (Homo sapiens, 70.1); Srprb (Mus musculus, 79.3); srprb (Danio rerio, 63.5); tf (Xenopus tropicalis, 63.5); SrpRbeta (Drosophila melanogaster, 75.1); R186.3 (Caenorhabditis elegans, 53.5); AT5G05670 (Arabidopsis thaliana, 60.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:148492-149226:+ | gene-YKL154W_AKU4011 | rna-NM_001179720.1_AKU4011 | cds-NP_012768.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:125065-125799:+ | gene-YKL154W_BG1 | rna-NM_001179720.1_BG1 | cds-NP_012768.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:166150-166884:+ | gene-YKL154W_Bruggeman | rna-NM_001179720.1_Bruggeman | cds-NP_012768.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:160966-161700:+ | gene-YKL154W_CAT1 | rna-NM_001179720.1_CAT1 | cds-NP_012768.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:160715-161449:+ | gene-YKL154W_CBS1585 | rna-NM_001179720.1_CBS1585 | cds-NP_012768.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:159309-160043:+ | gene-YKL154W_CBS436 | rna-NM_001179720.1_CBS436 | cds-NP_012768.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:145741-146475:+ | gene-YKL154W_CBS6412 | rna-NM_001179720.1_CBS6412 | cds-NP_012768.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:161187-161921:+ | gene-YKL154W_CBS6413 | rna-NM_001179720.1_CBS6413 | cds-NP_012768.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:161248-161982:+ | gene-YKL154W_CENPK1137D | rna-NM_001179720.1_CENPK1137D | cds-NP_012768.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:159238-159972:+ | gene-YKL154W_EthanolRed | rna-NM_001179720.1_EthanolRed | cds-NP_012768.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:160050-160784:+ | gene-YKL154W_FaliES1 | rna-NM_001179720.1_FaliES1 | cds-NP_012768.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000239.2:19016-19750:+ | gene-YKL154W_JAY291 | rna-NM_001179720.1_JAY291 | cds-NP_012768.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:168248-168982:+ | gene-YKL154W_MUCL30387 | rna-NM_001179720.1_MUCL30387 | cds-NP_012768.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:162602-163336:+ | gene-YKL154W_MUCL30388 | rna-NM_001179720.1_MUCL30388 | cds-NP_012768.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:160521-161255:+ | gene-YKL154W_MUCL39482 | rna-NM_001179720.1_MUCL39482 | cds-NP_012768.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:164933-165667:+ | gene-YKL154W_MUCL42920 | rna-NM_001179720.1_MUCL42920 | cds-NP_012768.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:161590-162324:+ | gene-YKL154W_NCIM3186 | rna-NM_001179720.1_NCIM3186 | cds-NP_012768.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:160718-161452:+ | gene-YKL154W_NCYC1407 | rna-NM_001179720.1_NCYC1407 | cds-NP_012768.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:167793-168527:+ | gene-YKL154W_PE2H3 | rna-NM_001179720.1_PE2H3 | cds-NP_012768.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:164087-164821:+ | gene-YKL154W_PE2H4 | rna-NM_001179720.1_PE2H4 | cds-NP_012768.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:161601-162335:+ | gene-YKL154W_S288C | rna-NM_001179720.1_S288C | cds-NP_012768.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:78018-78752:+ | gene-YKL154W_SA1 | rna-NM_001179720.1_SA1 | cds-NP_012768.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:160750-161484:+ | gene-YKL154W_ThermosaccDry | rna-NM_001179720.1_ThermosaccDry | cds-NP_012768.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:159586-160320:+ | gene-YKL154W_VR1 | rna-NM_001179720.1_VR1 | cds-NP_012768.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:159272-160006:+ | gene-YKL154W_ZTW1 | rna-NM_001179720.1_ZTW1 | cds-NP_012768.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:175460-176194:+ | gene-YKL154W_Sparadoxus | rna-NM_001179720.1_Sparadoxus | cds-NP_012768.1_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |