Gene name: SRP101
Reference locus (S288C): YDR292C
Gene biotype: protein_coding
Description: Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p
Top 10 interactors (score): SRP102 (0.999); SEC65 (0.997); SRP54 (0.987); SRP72 (0.984); PUF6 (0.983); SRP68 (0.972); SEC61 (0.938); SRP14 (0.916); RPL5 (0.879); RPL25 (0.872); SEC62 (0.853); KAR2 (0.829); SEC63 (0.823); RPL28 (0.815); SRP21 (0.813); MRPL10 (0.806); RPL3 (0.805); MRPL9 (0.795); SEC21 (0.78); SSH1 (0.766)
Homologues (species, bitscore): SRPR (Homo sapiens, 283.1); Srpr (Mus musculus, 276.6); srpr (Danio rerio, 272.3); srpra (Xenopus tropicalis, 184.1); Gtp-bp (Drosophila melanogaster, 253.4); F38A1.8 (Caenorhabditis elegans, 239.6); AT4G30600 (Arabidopsis thaliana, 245.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:995123-996988:- | gene-YDR292C_AKU4011 | rna-NM_001180600.3_AKU4011 | cds-NP_010578.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:134562-136427:+ | gene-YDR292C_BG1 | rna-NM_001180600.3_BG1 | cds-NP_010578.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1022402-1024267:- | gene-YDR292C_Bruggeman | rna-NM_001180600.3_Bruggeman | cds-NP_010578.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1009413-1011278:- | gene-YDR292C_CAT1 | rna-NM_001180600.3_CAT1 | cds-NP_010578.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:989568-991433:- | gene-YDR292C_CBS1585 | rna-NM_001180600.3_CBS1585 | cds-NP_010578.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1007941-1009806:- | gene-YDR292C_CBS436 | rna-NM_001180600.3_CBS436 | cds-NP_010578.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:986250-988115:- | gene-YDR292C_CBS6412 | rna-NM_001180600.3_CBS6412 | cds-NP_010578.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1007488-1009353:- | gene-YDR292C_CBS6413 | rna-NM_001180600.3_CBS6413 | cds-NP_010578.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1041792-1043657:- | gene-YDR292C_CENPK1137D | rna-NM_001180600.3_CENPK1137D | cds-NP_010578.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:993664-995529:- | gene-YDR292C_EthanolRed | rna-NM_001180600.3_EthanolRed | cds-NP_010578.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1001866-1003731:- | gene-YDR292C_FaliES1 | rna-NM_001180600.3_FaliES1 | cds-NP_010578.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:19699-21564:- | gene-YDR292C_JAY291 | rna-NM_001180600.3_JAY291 | cds-NP_010578.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1007918-1009783:- | gene-YDR292C_MUCL30387 | rna-NM_001180600.3_MUCL30387 | cds-NP_010578.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:994984-996849:- | gene-YDR292C_MUCL30388 | rna-NM_001180600.3_MUCL30388 | cds-NP_010578.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:981374-983239:- | gene-YDR292C_MUCL39482 | rna-NM_001180600.3_MUCL39482 | cds-NP_010578.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:921367-923232:- | gene-YDR292C_MUCL42920 | rna-NM_001180600.3_MUCL42920 | cds-NP_010578.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1043069-1044934:- | gene-YDR292C_NCIM3186 | rna-NM_001180600.3_NCIM3186 | cds-NP_010578.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:994667-996532:- | gene-YDR292C_NCYC1407 | rna-NM_001180600.3_NCYC1407 | cds-NP_010578.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1005671-1007536:- | gene-YDR292C_PE2H3 | rna-NM_001180600.3_PE2H3 | cds-NP_010578.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1011256-1013121:- | gene-YDR292C_PE2H4 | rna-NM_001180600.3_PE2H4 | cds-NP_010578.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1043146-1045011:- | gene-YDR292C_S288C | rna-NM_001180600.3_S288C | cds-NP_010578.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:19878-21743:- | gene-YDR292C_SA1 | rna-NM_001180600.3_SA1 | cds-NP_010578.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1006151-1008016:- | gene-YDR292C_ThermosaccDry | rna-NM_001180600.3_ThermosaccDry | cds-NP_010578.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1022097-1023962:- | gene-YDR292C_VR1 | rna-NM_001180600.3_VR1 | cds-NP_010578.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:50282-52147:- | gene-YDR292C_ZTW1 | rna-NM_001180600.3_ZTW1 | cds-NP_010578.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1001720-1003585:- | gene-YDR292C_Sparadoxus | rna-NM_001180600.3_Sparadoxus | cds-NP_010578.3_Sparadoxus | 90.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |