Gene name: SRL3
Reference locus (S288C): YKR091W
Gene biotype: protein_coding
Description: Protein SRL3; GTB motif (G1/S transcription factor binding) containing protein; binds SBF-regulated promoters in hydroxyurea-treated cells; when overexpressed, suppresses the lethality of a rad53 null mutation; potential Cdc28p substrate; SRL3 has a paralog, WHI5, that arose from the whole genome duplication
Top 10 interactors (score): CRG1 (0.93); CDC28 (0.877); STB1 (0.853); CLN3 (0.81); PRM5 (0.792); CLN2 (0.791); SWI4 (0.785); SWI6 (0.775); WHI5 (0.766); MSA1 (0.746); YNR065C (0.707); MSA2 (0.705); NCW2 (0.694); CKS1 (0.686); KDX1 (0.657); GRR1 (0.633); WHI3 (0.619); RAD53 (0.615); YKR015C (0.561); NRM1 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:597556-598296:+ | gene-YKR091W_AKU4011 | rna-NM_001179881.1_AKU4011 | cds-NP_013017.2_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:45929-46669:- | gene-YKR091W_BG1 | rna-NM_001179881.1_BG1 | cds-NP_013017.2_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:620134-620874:+ | gene-YKR091W_Bruggeman | rna-NM_001179881.1_Bruggeman | cds-NP_013017.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:616045-616785:+ | gene-YKR091W_CAT1 | rna-NM_001179881.1_CAT1 | cds-NP_013017.2_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:610043-610783:+ | gene-YKR091W_CBS1585 | rna-NM_001179881.1_CBS1585 | cds-NP_013017.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:608429-609169:+ | gene-YKR091W_CBS436 | rna-NM_001179881.1_CBS436 | cds-NP_013017.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:593331-594071:+ | gene-YKR091W_CBS6412 | rna-NM_001179881.1_CBS6412 | cds-NP_013017.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:609861-610601:+ | gene-YKR091W_CBS6413 | rna-NM_001179881.1_CBS6413 | cds-NP_013017.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:611180-611920:+ | gene-YKR091W_CENPK1137D | rna-NM_001179881.1_CENPK1137D | cds-NP_013017.2_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:607367-608107:+ | gene-YKR091W_EthanolRed | rna-NM_001179881.1_EthanolRed | cds-NP_013017.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:611262-612002:+ | gene-YKR091W_FaliES1 | rna-NM_001179881.1_FaliES1 | cds-NP_013017.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:32931-33671:- | gene-YKR091W_JAY291 | rna-NM_001179881.1_JAY291 | cds-NP_013017.2_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:619629-620369:+ | gene-YKR091W_MUCL30387 | rna-NM_001179881.1_MUCL30387 | cds-NP_013017.2_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:613973-614713:+ | gene-YKR091W_MUCL30388 | rna-NM_001179881.1_MUCL30388 | cds-NP_013017.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:608884-609624:+ | gene-YKR091W_MUCL39482 | rna-NM_001179881.1_MUCL39482 | cds-NP_013017.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:614907-615647:+ | gene-YKR091W_MUCL42920 | rna-NM_001179881.1_MUCL42920 | cds-NP_013017.2_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:611514-612254:+ | gene-YKR091W_NCIM3186 | rna-NM_001179881.1_NCIM3186 | cds-NP_013017.2_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:609296-610036:+ | gene-YKR091W_NCYC1407 | rna-NM_001179881.1_NCYC1407 | cds-NP_013017.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:634501-635241:+ | gene-YKR091W_PE2H3 | rna-NM_001179881.1_PE2H3 | cds-NP_013017.2_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:618905-619645:+ | gene-YKR091W_PE2H4 | rna-NM_001179881.1_PE2H4 | cds-NP_013017.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:611525-612265:+ | gene-YKR091W_S288C | rna-NM_001179881.1_S288C | cds-NP_013017.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:69585-70325:- | gene-YKR091W_SA1 | rna-NM_001179881.1_SA1 | cds-NP_013017.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:610509-611249:+ | gene-YKR091W_ThermosaccDry | rna-NM_001179881.1_ThermosaccDry | cds-NP_013017.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:609772-610512:+ | gene-YKR091W_VR1 | rna-NM_001179881.1_VR1 | cds-NP_013017.2_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:607490-608230:+ | gene-YKR091W_ZTW1 | rna-NM_001179881.1_ZTW1 | cds-NP_013017.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:632800-633582:+ | gene-YKR091W_Sparadoxus | rna-NM_001179881.1_Sparadoxus | cds-NP_013017.2_Sparadoxus | 82.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |