Gene name: SRL1
Reference locus (S288C): YOR247W
Gene biotype: protein_coding
Description: Cell wall protein SRL1; Mannoprotein that exhibits a tight association with the cell wall; required for cell wall stability in the absence of GPI-anchored mannoproteins; has a high serine-threonine content; expression is induced in cell wall mutants; SRL1 has a paralog, SVS1, that arose from the whole genome duplication
Top 10 interactors (score): YOR248W (0.992); SIM1 (0.895); CCW12 (0.822); ZRG8 (0.81); SHE2 (0.806); TOS6 (0.78); CBK1 (0.775); HRB1 (0.711); PUF6 (0.694); LOC1 (0.691); CIS3 (0.591); YBL111C (0.573); IST2 (0.572); EGT2 (0.571); SCW10 (0.558); MYO4 (0.557); EAR1 (0.525); PAU7 (0.525); ALK2 (0.524); SKG6 (0.523)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:788448-789080:+ | gene-YOR247W_AKU4011 | rna-NM_001183666.1_AKU4011 | cds-NP_014890.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:190490-191122:+ | gene-YOR247W_BG1 | rna-NM_001183666.1_BG1 | cds-NP_014890.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:773916-774548:+ | gene-YOR247W_Bruggeman | rna-NM_001183666.1_Bruggeman | cds-NP_014890.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:774567-775199:+ | gene-YOR247W_CAT1 | rna-NM_001183666.1_CAT1 | cds-NP_014890.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:771437-772069:+ | gene-YOR247W_CBS1585 | rna-NM_001183666.1_CBS1585 | cds-NP_014890.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:770132-770764:+ | gene-YOR247W_CBS436 | rna-NM_001183666.1_CBS436 | cds-NP_014890.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:768556-769188:+ | gene-YOR247W_CBS6412 | rna-NM_001183666.1_CBS6412 | cds-NP_014890.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:777196-777828:+ | gene-YOR247W_CBS6413 | rna-NM_001183666.1_CBS6413 | cds-NP_014890.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:797440-798072:+ | gene-YOR247W_CENPK1137D | rna-NM_001183666.1_CENPK1137D | cds-NP_014890.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:764566-765198:+ | gene-YOR247W_EthanolRed | rna-NM_001183666.1_EthanolRed | cds-NP_014890.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:769965-770597:+ | gene-YOR247W_FaliES1 | rna-NM_001183666.1_FaliES1 | cds-NP_014890.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:56235-56867:- | gene-YOR247W_JAY291 | rna-NM_001183666.1_JAY291 | cds-NP_014890.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:778188-778820:+ | gene-YOR247W_MUCL30387 | rna-NM_001183666.1_MUCL30387 | cds-NP_014890.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:785305-785937:+ | gene-YOR247W_MUCL30388 | rna-NM_001183666.1_MUCL30388 | cds-NP_014890.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:778767-779399:+ | gene-YOR247W_MUCL39482 | rna-NM_001183666.1_MUCL39482 | cds-NP_014890.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:788357-788989:+ | gene-YOR247W_MUCL42920 | rna-NM_001183666.1_MUCL42920 | cds-NP_014890.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:797565-798197:+ | gene-YOR247W_NCIM3186 | rna-NM_001183666.1_NCIM3186 | cds-NP_014890.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:778866-779498:+ | gene-YOR247W_NCYC1407 | rna-NM_001183666.1_NCYC1407 | cds-NP_014890.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:778170-778802:+ | gene-YOR247W_PE2H3 | rna-NM_001183666.1_PE2H3 | cds-NP_014890.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:788547-789179:+ | gene-YOR247W_PE2H4 | rna-NM_001183666.1_PE2H4 | cds-NP_014890.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:797676-798308:+ | gene-YOR247W_S288C | rna-NM_001183666.1_S288C | cds-NP_014890.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:207671-208303:+ | gene-YOR247W_SA1 | rna-NM_001183666.1_SA1 | cds-NP_014890.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:769148-769780:+ | gene-YOR247W_ThermosaccDry | rna-NM_001183666.1_ThermosaccDry | cds-NP_014890.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:832610-833242:+ | gene-YOR247W_VR1 | rna-NM_001183666.1_VR1 | cds-NP_014890.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:502063-502695:+ | gene-YOR247W_ZTW1 | rna-NM_001183666.1_ZTW1 | cds-NP_014890.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:775054-775671:+ | gene-YOR247W_Sparadoxus | rna-NM_001183666.1_Sparadoxus | cds-NP_014890.1_Sparadoxus | 87.8 | 97.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |