Gene name: SRB8
Reference locus (S288C): YCR081W
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in glucose repression
Top 10 interactors (score): SSN3 (0.999); SSN8 (0.999); SSN2 (0.999); SIN4 (0.995); NUT1 (0.989); MED7 (0.988); MED2 (0.986); SOH1 (0.975); ROX3 (0.966); RGR1 (0.964); SRB7 (0.952); GAL11 (0.941); AHC2 (0.918); SRB5 (0.861); SRB6 (0.856); PGD1 (0.846); CSE2 (0.839); MED8 (0.826); SRB2 (0.815); SRB4 (0.789)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:248872-253155:+ | gene-YCR081W_AKU4011 | rna-NM_001178787.1_AKU4011 | cds-NP_010004.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:107528-111811:+ | gene-YCR081W_BG1 | rna-NM_001178787.1_BG1 | cds-NP_010004.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:245083-249366:+ | gene-YCR081W_Bruggeman | rna-NM_001178787.1_Bruggeman | cds-NP_010004.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:256133-260416:+ | gene-YCR081W_CAT1 | rna-NM_001178787.1_CAT1 | cds-NP_010004.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:243687-247970:+ | gene-YCR081W_CBS1585 | rna-NM_001178787.1_CBS1585 | cds-NP_010004.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:255468-259751:+ | gene-YCR081W_CBS436 | rna-NM_001178787.1_CBS436 | cds-NP_010004.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:235389-239672:+ | gene-YCR081W_CBS6412 | rna-NM_001178787.1_CBS6412 | cds-NP_010004.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:249737-254020:+ | gene-YCR081W_CBS6413 | rna-NM_001178787.1_CBS6413 | cds-NP_010004.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:253568-257851:+ | gene-YCR081W_CENPK1137D | rna-NM_001178787.1_CENPK1137D | cds-NP_010004.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:244687-248970:+ | gene-YCR081W_EthanolRed | rna-NM_001178787.1_EthanolRed | cds-NP_010004.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:250050-254333:+ | gene-YCR081W_FaliES1 | rna-NM_001178787.1_FaliES1 | cds-NP_010004.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000323.1:34457-38740:- | gene-YCR081W_JAY291 | rna-NM_001178787.1_JAY291 | cds-NP_010004.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:242211-246494:+ | gene-YCR081W_MUCL30387 | rna-NM_001178787.1_MUCL30387 | cds-NP_010004.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:242078-246361:+ | gene-YCR081W_MUCL30388 | rna-NM_001178787.1_MUCL30388 | cds-NP_010004.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:250251-254534:+ | gene-YCR081W_MUCL39482 | rna-NM_001178787.1_MUCL39482 | cds-NP_010004.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:246657-250940:+ | gene-YCR081W_MUCL42920 | rna-NM_001178787.1_MUCL42920 | cds-NP_010004.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:254003-258286:+ | gene-YCR081W_NCIM3186 | rna-NM_001178787.1_NCIM3186 | cds-NP_010004.1_NCIM3186 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:251090-255373:+ | gene-YCR081W_NCYC1407 | rna-NM_001178787.1_NCYC1407 | cds-NP_010004.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:265645-269928:+ | gene-YCR081W_PE2H3 | rna-NM_001178787.1_PE2H3 | cds-NP_010004.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:254199-258482:+ | gene-YCR081W_PE2H4 | rna-NM_001178787.1_PE2H4 | cds-NP_010004.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:254371-258654:+ | gene-YCR081W_S288C | rna-NM_001178787.1_S288C | cds-NP_010004.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:54220-58503:+ | gene-YCR081W_SA1 | rna-NM_001178787.1_SA1 | cds-NP_010004.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:249977-254260:+ | gene-YCR081W_ThermosaccDry | rna-NM_001178787.1_ThermosaccDry | cds-NP_010004.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:261187-265470:+ | gene-YCR081W_VR1 | rna-NM_001178787.1_VR1 | cds-NP_010004.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:247832-252115:+ | gene-YCR081W_ZTW1 | rna-NM_001178787.1_ZTW1 | cds-NP_010004.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:281970-286262:+ | gene-YCR081W_Sparadoxus | rna-NM_001178787.1_Sparadoxus | cds-NP_010004.1_Sparadoxus | 89.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |