Gene name: SRB7
Reference locus (S288C): YDR308C
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; target of the global repressor Tup1p
Top 10 interactors (score): MED6 (0.999); SOH1 (0.999); MED7 (0.999); SRB4 (0.999); RGR1 (0.999); MED8 (0.999); MED4 (0.999); NUT2 (0.999); SRB6 (0.999); ROX3 (0.998); SSN3 (0.997); SRB5 (0.997); MED11 (0.996); CSE2 (0.996); GAL11 (0.995); RPO21 (0.993); PGD1 (0.993); SSN8 (0.993); SRB2 (0.993); SIN4 (0.993)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1030041-1030463:- | gene-YDR308C_AKU4011 | rna-NM_001180616.3_AKU4011 | cds-NP_010594.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:101115-101537:+ | gene-YDR308C_BG1 | rna-NM_001180616.3_BG1 | cds-NP_010594.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1057307-1057729:- | gene-YDR308C_Bruggeman | rna-NM_001180616.3_Bruggeman | cds-NP_010594.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1044306-1044728:- | gene-YDR308C_CAT1 | rna-NM_001180616.3_CAT1 | cds-NP_010594.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1024487-1024909:- | gene-YDR308C_CBS1585 | rna-NM_001180616.3_CBS1585 | cds-NP_010594.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1042855-1043277:- | gene-YDR308C_CBS436 | rna-NM_001180616.3_CBS436 | cds-NP_010594.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1021169-1021591:- | gene-YDR308C_CBS6412 | rna-NM_001180616.3_CBS6412 | cds-NP_010594.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1042406-1042828:- | gene-YDR308C_CBS6413 | rna-NM_001180616.3_CBS6413 | cds-NP_010594.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1076672-1077094:- | gene-YDR308C_CENPK1137D | rna-NM_001180616.3_CENPK1137D | cds-NP_010594.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1028397-1028819:- | gene-YDR308C_EthanolRed | rna-NM_001180616.3_EthanolRed | cds-NP_010594.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1036799-1037221:- | gene-YDR308C_FaliES1 | rna-NM_001180616.3_FaliES1 | cds-NP_010594.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:54591-55013:- | gene-YDR308C_JAY291 | rna-NM_001180616.3_JAY291 | cds-NP_010594.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1042793-1043215:- | gene-YDR308C_MUCL30387 | rna-NM_001180616.3_MUCL30387 | cds-NP_010594.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1029890-1030312:- | gene-YDR308C_MUCL30388 | rna-NM_001180616.3_MUCL30388 | cds-NP_010594.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1016293-1016715:- | gene-YDR308C_MUCL39482 | rna-NM_001180616.3_MUCL39482 | cds-NP_010594.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:957439-957861:- | gene-YDR308C_MUCL42920 | rna-NM_001180616.3_MUCL42920 | cds-NP_010594.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1077950-1078372:- | gene-YDR308C_NCIM3186 | rna-NM_001180616.3_NCIM3186 | cds-NP_010594.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1029585-1030007:- | gene-YDR308C_NCYC1407 | rna-NM_001180616.3_NCYC1407 | cds-NP_010594.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1040564-1040986:- | gene-YDR308C_PE2H3 | rna-NM_001180616.3_PE2H3 | cds-NP_010594.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1046149-1046571:- | gene-YDR308C_PE2H4 | rna-NM_001180616.3_PE2H4 | cds-NP_010594.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1078027-1078449:- | gene-YDR308C_S288C | rna-NM_001180616.3_S288C | cds-NP_010594.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:54764-55186:- | gene-YDR308C_SA1 | rna-NM_001180616.3_SA1 | cds-NP_010594.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1041072-1041494:- | gene-YDR308C_ThermosaccDry | rna-NM_001180616.3_ThermosaccDry | cds-NP_010594.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1056983-1057405:- | gene-YDR308C_VR1 | rna-NM_001180616.3_VR1 | cds-NP_010594.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:85185-85607:- | gene-YDR308C_ZTW1 | rna-NM_001180616.3_ZTW1 | cds-NP_010594.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1036611-1037033:- | gene-YDR308C_Sparadoxus | rna-NM_001180616.3_Sparadoxus | cds-NP_010594.3_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |