Gene name: SRB2
Reference locus (S288C): YHR041C
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; general transcription factor involved in telomere maintenance
Top 10 interactors (score): SRB5 (0.999); SRB4 (0.999); SRB6 (0.999); MED11 (0.999); SOH1 (0.999); MED8 (0.999); GAL11 (0.998); RGR1 (0.998); MED7 (0.998); CSE2 (0.998); NUT2 (0.997); MED6 (0.997); MED2 (0.996); MED4 (0.996); PGD1 (0.996); ROX3 (0.993); SRB7 (0.993); SIN4 (0.99); MED1 (0.99); RPO21 (0.973)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:177403-178135:- | gene-YHR041C_AKU4011 | rna-NM_001179171.1_AKU4011 | cds-NP_011907.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:97607-98339:- | gene-YHR041C_BG1 | rna-NM_001179171.1_BG1 | cds-NP_011907.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:184834-185566:- | gene-YHR041C_Bruggeman | rna-NM_001179171.1_Bruggeman | cds-NP_011907.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:179221-179953:- | gene-YHR041C_CAT1 | rna-NM_001179171.1_CAT1 | cds-NP_011907.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:177772-178504:- | gene-YHR041C_CBS1585 | rna-NM_001179171.1_CBS1585 | cds-NP_011907.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:172005-172737:- | gene-YHR041C_CBS436 | rna-NM_001179171.1_CBS436 | cds-NP_011907.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:176737-177469:- | gene-YHR041C_CBS6412 | rna-NM_001179171.1_CBS6412 | cds-NP_011907.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:177574-178306:- | gene-YHR041C_CBS6413 | rna-NM_001179171.1_CBS6413 | cds-NP_011907.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:182392-183125:- | gene-YHR041C_CENPK1137D | rna-NM_001179171.1_CENPK1137D | cds-NP_011907.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:176900-177632:- | gene-YHR041C_EthanolRed | rna-NM_001179171.1_EthanolRed | cds-NP_011907.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:177877-178609:- | gene-YHR041C_FaliES1 | rna-NM_001179171.1_FaliES1 | cds-NP_011907.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000273.1:3023-3755:+ | gene-YHR041C_JAY291 | rna-NM_001179171.1_JAY291 | cds-NP_011907.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:183905-184637:- | gene-YHR041C_MUCL30387 | rna-NM_001179171.1_MUCL30387 | cds-NP_011907.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:184375-185107:- | gene-YHR041C_MUCL30388 | rna-NM_001179171.1_MUCL30388 | cds-NP_011907.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:176795-177527:- | gene-YHR041C_MUCL39482 | rna-NM_001179171.1_MUCL39482 | cds-NP_011907.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:183464-184196:- | gene-YHR041C_MUCL42920 | rna-NM_001179171.1_MUCL42920 | cds-NP_011907.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:189013-189746:- | gene-YHR041C_NCIM3186 | rna-NM_001179171.1_NCIM3186 | cds-NP_011907.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:176669-177401:- | gene-YHR041C_NCYC1407 | rna-NM_001179171.1_NCYC1407 | cds-NP_011907.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:179001-179733:- | gene-YHR041C_PE2H3 | rna-NM_001179171.1_PE2H3 | cds-NP_011907.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:186448-187180:- | gene-YHR041C_PE2H4 | rna-NM_001179171.1_PE2H4 | cds-NP_011907.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:189131-189864:- | gene-YHR041C_S288C | rna-NM_001179171.1_S288C | cds-NP_011907.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:168712-169444:+ | gene-YHR041C_SA1 | rna-NM_001179171.1_SA1 | cds-NP_011907.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:178968-179700:- | gene-YHR041C_ThermosaccDry | rna-NM_001179171.1_ThermosaccDry | cds-NP_011907.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:185499-186231:- | gene-YHR041C_VR1 | rna-NM_001179171.1_VR1 | cds-NP_011907.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:170514-171246:- | gene-YHR041C_ZTW1 | rna-NM_001179171.1_ZTW1 | cds-NP_011907.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:176578-177309:- | gene-YHR041C_Sparadoxus | rna-NM_001179171.1_Sparadoxus | cds-NP_011907.1_Sparadoxus | 90.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |