Gene name: SPS4
Reference locus (S288C): YOR313C
Gene biotype: protein_coding
Description: Sporulation-specific protein 4; Protein whose expression is induced during sporulation; not required for sporulation; heterologous expression in E. coli induces the SOS response that senses DNA damage
Top 10 interactors (score): YDR131C (0.706); PET10 (0.698); SPS100 (0.698); YDR510C-A (0.694); CTR1 (0.691); GFD2 (0.655); HEL1 (0.651); SPO1 (0.592); YER135C (0.574); SUM1 (0.573); UME6 (0.569); SPS2 (0.527); NDT80 (0.526); IME2 (0.525); SPR1 (0.504); SEI1 (0.499); LDB16 (0.499); IME1 (0.489); PCI8 (0.483); CDA2 (0.464)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:892341-893357:- | gene-YOR313C_AKU4011 | rna-NM_001183733.3_AKU4011 | cds-NP_014958.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:294348-295364:- | gene-YOR313C_BG1 | rna-NM_001183733.3_BG1 | cds-NP_014958.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:877756-878772:- | gene-YOR313C_Bruggeman | rna-NM_001183733.3_Bruggeman | cds-NP_014958.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:878466-879482:- | gene-YOR313C_CAT1 | rna-NM_001183733.3_CAT1 | cds-NP_014958.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:876161-877177:- | gene-YOR313C_CBS1585 | rna-NM_001183733.3_CBS1585 | cds-NP_014958.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:873989-875005:- | gene-YOR313C_CBS436 | rna-NM_001183733.3_CBS436 | cds-NP_014958.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:871869-872885:- | gene-YOR313C_CBS6412 | rna-NM_001183733.3_CBS6412 | cds-NP_014958.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:880997-882013:- | gene-YOR313C_CBS6413 | rna-NM_001183733.3_CBS6413 | cds-NP_014958.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:901634-902650:- | gene-YOR313C_CENPK1137D | rna-NM_001183733.3_CENPK1137D | cds-NP_014958.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:868259-869275:- | gene-YOR313C_EthanolRed | rna-NM_001183733.3_EthanolRed | cds-NP_014958.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:873882-874898:- | gene-YOR313C_FaliES1 | rna-NM_001183733.3_FaliES1 | cds-NP_014958.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:128372-129388:+ | gene-YOR313C_JAY291 | rna-NM_001183733.3_JAY291 | cds-NP_014958.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:881995-883011:- | gene-YOR313C_MUCL30387 | rna-NM_001183733.3_MUCL30387 | cds-NP_014958.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:890003-891019:- | gene-YOR313C_MUCL30388 | rna-NM_001183733.3_MUCL30388 | cds-NP_014958.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:882706-883722:- | gene-YOR313C_MUCL39482 | rna-NM_001183733.3_MUCL39482 | cds-NP_014958.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:892175-893191:- | gene-YOR313C_MUCL42920 | rna-NM_001183733.3_MUCL42920 | cds-NP_014958.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:901747-902763:- | gene-YOR313C_NCIM3186 | rna-NM_001183733.3_NCIM3186 | cds-NP_014958.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:883707-884723:- | gene-YOR313C_NCYC1407 | rna-NM_001183733.3_NCYC1407 | cds-NP_014958.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:881928-882944:- | gene-YOR313C_PE2H3 | rna-NM_001183733.3_PE2H3 | cds-NP_014958.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:898280-899296:- | gene-YOR313C_PE2H4 | rna-NM_001183733.3_PE2H4 | cds-NP_014958.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:901858-902874:- | gene-YOR313C_S288C | rna-NM_001183733.3_S288C | cds-NP_014958.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:12179-13195:- | gene-YOR313C_SA1 | rna-NM_001183733.3_SA1 | cds-NP_014958.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:873065-874081:- | gene-YOR313C_ThermosaccDry | rna-NM_001183733.3_ThermosaccDry | cds-NP_014958.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:936350-937366:- | gene-YOR313C_VR1 | rna-NM_001183733.3_VR1 | cds-NP_014958.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:605935-606951:- | gene-YOR313C_ZTW1 | rna-NM_001183733.3_ZTW1 | cds-NP_014958.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:880172-881188:- | gene-YOR313C_Sparadoxus | rna-NM_001183733.3_Sparadoxus | cds-NP_014958.3_Sparadoxus | 86.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |