Gene name: SPS18
Reference locus (S288C): YNL204C
Gene biotype: protein_coding
Description: Sporulation protein SPS18; Protein of unknown function, contains a putative zinc-binding domain; expressed during sporulation; SPS18 has a paralog, GCS1, that arose from the whole genome duplication
Top 10 interactors (score): GLO3 (0.997); ARF1 (0.975); ARF2 (0.967); ERD2 (0.936); COP1 (0.922); SEC21 (0.915); SPS19 (0.895); SEC28 (0.85); SEC26 (0.849); GEA2 (0.841); YKT6 (0.841); SEC27 (0.836); RET2 (0.83); RET3 (0.827); AGE1 (0.813); YPT11 (0.754); YPT1 (0.742); CTL1 (0.715); SEC22 (0.707); USO1 (0.684)
Homologues (species, bitscore): ARFGAP1 (Homo sapiens, 82.8); Arfgap1 (Mus musculus, 85.9); ARFGAP1 (Danio rerio, 79.3); arfgap1 (Xenopus tropicalis, 83.6); ArfGAP1 (Drosophila melanogaster, 78.2); K02B12.7 (Caenorhabditis elegans, 88.2); AGD7 (Arabidopsis thaliana, 81.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:252152-253054:- | gene-YNL204C_AKU4011 | rna-NM_001183042.1_AKU4011 | cds-NP_014195.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:156102-157004:- | gene-YNL204C_BG1 | rna-NM_001183042.1_BG1 | cds-NP_014195.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:262202-263104:- | gene-YNL204C_Bruggeman | rna-NM_001183042.1_Bruggeman | cds-NP_014195.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:304444-305346:- | gene-YNL204C_CAT1 | rna-NM_001183042.1_CAT1 | cds-NP_014195.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:252798-253700:- | gene-YNL204C_CBS1585 | rna-NM_001183042.1_CBS1585 | cds-NP_014195.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:321087-321989:- | gene-YNL204C_CBS436 | rna-NM_001183042.1_CBS436 | cds-NP_014195.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:248210-249112:- | gene-YNL204C_CBS6412 | rna-NM_001183042.1_CBS6412 | cds-NP_014195.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:249231-250133:- | gene-YNL204C_CBS6413 | rna-NM_001183042.1_CBS6413 | cds-NP_014195.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:252223-253125:- | gene-YNL204C_CENPK1137D | rna-NM_001183042.1_CENPK1137D | cds-NP_014195.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:249120-250022:- | gene-YNL204C_EthanolRed | rna-NM_001183042.1_EthanolRed | cds-NP_014195.1_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:245033-245935:- | gene-YNL204C_FaliES1 | rna-NM_001183042.1_FaliES1 | cds-NP_014195.1_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:72429-73331:+ | gene-YNL204C_JAY291 | rna-NM_001183042.1_JAY291 | cds-NP_014195.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:257988-258890:- | gene-YNL204C_MUCL30387 | rna-NM_001183042.1_MUCL30387 | cds-NP_014195.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:292355-293257:- | gene-YNL204C_MUCL30388 | rna-NM_001183042.1_MUCL30388 | cds-NP_014195.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:250037-250939:- | gene-YNL204C_MUCL39482 | rna-NM_001183042.1_MUCL39482 | cds-NP_014195.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:252404-253306:- | gene-YNL204C_MUCL42920 | rna-NM_001183042.1_MUCL42920 | cds-NP_014195.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:258344-259246:- | gene-YNL204C_NCIM3186 | rna-NM_001183042.1_NCIM3186 | cds-NP_014195.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:252127-253029:- | gene-YNL204C_NCYC1407 | rna-NM_001183042.1_NCYC1407 | cds-NP_014195.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:249039-249941:- | gene-YNL204C_PE2H3 | rna-NM_001183042.1_PE2H3 | cds-NP_014195.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:248427-249329:- | gene-YNL204C_PE2H4 | rna-NM_001183042.1_PE2H4 | cds-NP_014195.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:258375-259277:- | gene-YNL204C_S288C | rna-NM_001183042.1_S288C | cds-NP_014195.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:154321-155223:+ | gene-YNL204C_SA1 | rna-NM_001183042.1_SA1 | cds-NP_014195.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:245890-246792:- | gene-YNL204C_ThermosaccDry | rna-NM_001183042.1_ThermosaccDry | cds-NP_014195.1_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:264394-265296:- | gene-YNL204C_VR1 | rna-NM_001183042.1_VR1 | cds-NP_014195.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:155723-156625:- | gene-YNL204C_ZTW1 | rna-NM_001183042.1_ZTW1 | cds-NP_014195.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:256224-257126:- | gene-YNL204C_Sparadoxus | rna-NM_001183042.1_Sparadoxus | cds-NP_014195.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |