SPS100 (YHR139C)


Gene profile

Gene name: SPS100
Reference locus (S288C): YHR139C
Gene biotype: protein_coding

Description: Protein required for spore wall maturation; expressed during sporulation; may be a component of the spore wall; expression also induced in cells treated with the mycotoxin patulin; SPS100 has a paralog, YGP1, that arose from the whole genome duplication

Top 10 interactors (score): GRE1 (0.941); DIT1 (0.903); HXT5 (0.863); GIP1 (0.855); IME1 (0.783); SHC1 (0.713); SPS4 (0.698); HBT1 (0.659); YLR050C (0.653); SPR6 (0.617); ANS1 (0.614); YHR140W (0.599); YNL195C (0.581); AIM20 (0.569); IDS2 (0.565); PRM6 (0.563); YLR012C (0.562); PAU8 (0.562); TKL2 (0.548); VPS62 (0.526)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:365127-366107:- gene-YHR139C_AKU4011 rna-NM_001179269.1_AKU4011 cds-NP_012007.1_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:151730-152710:+ gene-YHR139C_BG1 rna-NM_001179269.1_BG1 cds-NP_012007.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:372590-373570:- gene-YHR139C_Bruggeman rna-NM_001179269.1_Bruggeman cds-NP_012007.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:367560-368540:- gene-YHR139C_CAT1 rna-NM_001179269.1_CAT1 cds-NP_012007.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:364149-365129:- gene-YHR139C_CBS1585 rna-NM_001179269.1_CBS1585 cds-NP_012007.1_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:361501-362481:- gene-YHR139C_CBS436 rna-NM_001179269.1_CBS436 cds-NP_012007.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:365590-366570:- gene-YHR139C_CBS6412 rna-NM_001179269.1_CBS6412 cds-NP_012007.1_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:365179-366159:- gene-YHR139C_CBS6413 rna-NM_001179269.1_CBS6413 cds-NP_012007.1_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:371390-372370:- gene-YHR139C_CENPK1137D rna-NM_001179269.1_CENPK1137D cds-NP_012007.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:424041-425021:- gene-YHR139C_EthanolRed rna-NM_001179269.1_EthanolRed cds-NP_012007.1_EthanolRed 99.2 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:365530-366510:- gene-YHR139C_FaliES1 rna-NM_001179269.1_FaliES1 cds-NP_012007.1_FaliES1 99.2 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000275.1:7672-8652:- gene-YHR139C_JAY291 rna-NM_001179269.1_JAY291 cds-NP_012007.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:372345-373325:- gene-YHR139C_MUCL30387 rna-NM_001179269.1_MUCL30387 cds-NP_012007.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:372355-373335:- gene-YHR139C_MUCL30388 rna-NM_001179269.1_MUCL30388 cds-NP_012007.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:364493-365473:- gene-YHR139C_MUCL39482 rna-NM_001179269.1_MUCL39482 cds-NP_012007.1_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:370708-371688:- gene-YHR139C_MUCL42920 rna-NM_001179269.1_MUCL42920 cds-NP_012007.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:378101-379081:- gene-YHR139C_NCIM3186 rna-NM_001179269.1_NCIM3186 cds-NP_012007.1_NCIM3186 99.2 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:366701-367681:- gene-YHR139C_NCYC1407 rna-NM_001179269.1_NCYC1407 cds-NP_012007.1_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:366159-367139:- gene-YHR139C_PE2H3 rna-NM_001179269.1_PE2H3 cds-NP_012007.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:373586-374566:- gene-YHR139C_PE2H4 rna-NM_001179269.1_PE2H4 cds-NP_012007.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:378219-379199:- gene-YHR139C_S288C rna-NM_001179269.1_S288C cds-NP_012007.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000103.1:10204-11184:+ gene-YHR139C_SA1 rna-NM_001179269.1_SA1 cds-NP_012007.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:366613-367593:- gene-YHR139C_ThermosaccDry rna-NM_001179269.1_ThermosaccDry cds-NP_012007.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:375069-376049:- gene-YHR139C_VR1 rna-NM_001179269.1_VR1 cds-NP_012007.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:357607-358587:- gene-YHR139C_ZTW1 rna-NM_001179269.1_ZTW1 cds-NP_012007.1_ZTW1 99.2 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:364024-365010:- gene-YHR139C_Sparadoxus rna-NM_001179269.1_Sparadoxus cds-NP_012007.1_Sparadoxus 89.9 100.0 Mismatch 1 1 1 False True False False False

Additional files