Gene name: SPR3
Reference locus (S288C): YGR059W
Gene biotype: protein_coding
Description: Sporulation-regulated protein 3; Sporulation-specific homolog of the CDC3/10/11/12 family of genes; septin protein involved in sporulation; regulated by ABFI; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Septin GTPase family
Top 10 interactors (score): CDC10 (0.965); CDC3 (0.959); SPR28 (0.956); SHS1 (0.934); CDC11 (0.921); CDC12 (0.918); YSW1 (0.916); GIP1 (0.733); IRC11 (0.711); SPR1 (0.697); SPS2 (0.696); SMK1 (0.656); CDA2 (0.639); DIT1 (0.638); SUM1 (0.619); DCR2 (0.615); RFM1 (0.574); SPO73 (0.563); LOH1 (0.545); BIR1 (0.505)
Homologues (species, bitscore): SEPT4 (Homo sapiens, 205.7); Sept7 (Mus musculus, 219.5); sept7b (Danio rerio, 221.5); sept7 (Xenopus tropicalis, 225.3); pnut (Drosophila melanogaster, 214.2); unc-59 (Caenorhabditis elegans, 193.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:591263-592801:+ | gene-YGR059W_AKU4011 | rna-NM_001181188.3_AKU4011 | cds-NP_011573.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:27658-29196:+ | gene-YGR059W_BG1 | rna-NM_001181188.3_BG1 | cds-NP_011573.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:593542-595080:+ | gene-YGR059W_Bruggeman | rna-NM_001181188.3_Bruggeman | cds-NP_011573.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:591970-593508:+ | gene-YGR059W_CAT1 | rna-NM_001181188.3_CAT1 | cds-NP_011573.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:592577-594115:+ | gene-YGR059W_CBS1585 | rna-NM_001181188.3_CBS1585 | cds-NP_011573.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:593866-595404:+ | gene-YGR059W_CBS436 | rna-NM_001181188.3_CBS436 | cds-NP_011573.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:585372-586910:+ | gene-YGR059W_CBS6412 | rna-NM_001181188.3_CBS6412 | cds-NP_011573.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:589374-590912:+ | gene-YGR059W_CBS6413 | rna-NM_001181188.3_CBS6413 | cds-NP_011573.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:607301-608839:+ | gene-YGR059W_CENPK1137D | rna-NM_001181188.3_CENPK1137D | cds-NP_011573.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:579504-581042:+ | gene-YGR059W_EthanolRed | rna-NM_001181188.3_EthanolRed | cds-NP_011573.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:582988-584526:+ | gene-YGR059W_FaliES1 | rna-NM_001181188.3_FaliES1 | cds-NP_011573.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:33928-35466:+ | gene-YGR059W_JAY291 | rna-NM_001181188.3_JAY291 | cds-NP_011573.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:590177-591715:+ | gene-YGR059W_MUCL30387 | rna-NM_001181188.3_MUCL30387 | cds-NP_011573.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:593574-595112:+ | gene-YGR059W_MUCL30388 | rna-NM_001181188.3_MUCL30388 | cds-NP_011573.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:588394-589932:+ | gene-YGR059W_MUCL39482 | rna-NM_001181188.3_MUCL39482 | cds-NP_011573.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:598201-599739:+ | gene-YGR059W_MUCL42920 | rna-NM_001181188.3_MUCL42920 | cds-NP_011573.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:607563-609101:+ | gene-YGR059W_NCIM3186 | rna-NM_001181188.3_NCIM3186 | cds-NP_011573.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:582592-584130:+ | gene-YGR059W_NCYC1407 | rna-NM_001181188.3_NCYC1407 | cds-NP_011573.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:585830-587368:+ | gene-YGR059W_PE2H3 | rna-NM_001181188.3_PE2H3 | cds-NP_011573.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:590937-592475:+ | gene-YGR059W_PE2H4 | rna-NM_001181188.3_PE2H4 | cds-NP_011573.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:607563-609101:+ | gene-YGR059W_S288C | rna-NM_001181188.3_S288C | cds-NP_011573.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:34029-35567:+ | gene-YGR059W_SA1 | rna-NM_001181188.3_SA1 | cds-NP_011573.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:602325-603863:+ | gene-YGR059W_ThermosaccDry | rna-NM_001181188.3_ThermosaccDry | cds-NP_011573.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:699251-700789:+ | gene-YGR059W_VR1 | rna-NM_001181188.3_VR1 | cds-NP_011573.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:57799-59337:+ | gene-YGR059W_ZTW1 | rna-NM_001181188.3_ZTW1 | cds-NP_011573.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:592846-594381:+ | gene-YGR059W_Sparadoxus | rna-NM_001181188.3_Sparadoxus | cds-NP_011573.3_Sparadoxus | 89.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |