SPO24 (YPR036W-A)


Gene profile

Gene name: SPO24
Reference locus (S288C): YPR036W-A
Gene biotype: protein_coding

Description: Uncharacterized protein YPR036W-A; Small (67 amino acids) protein involved in sporulation; localizes to the prospore membrane; phosphorylated during meiosis; a longer, 5'-extended mRNA is also transcribed beginning in mid-meiosis, regulated by two MSEs (middle sporulation elements), and includes an uORF of 15 codons in its 5'-UTR; evidence transcription is regulated by Pdr1p

Top 10 interactors (score): YJL127C-B (0.78); YIL156W-B (0.78); ATG41 (0.768); YIR035C (0.762); YSC83 (0.76); CMC4 (0.749); ERI1 (0.745); YOL057W (0.712); YSF3 (0.711); HSK3 (0.673); YCL048W-A (0.566); KSH1 (0.564); LIH1 (0.525); NDT80 (0.521); ERV2 (0.499); IDP1 (0.483); PRP8 (0.483); SPO20 (0.482); VMA13 (0.454); COX9 (0.453)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:617626-617829:+ gene-YPR036W-A_AKU4011 rna-NM_001184516.1_AKU4011 cds-NP_690847.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:279852-280055:- gene-YPR036W-A_BG1 rna-NM_001184516.1_BG1 cds-NP_690847.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:695273-695476:+ gene-YPR036W-A_Bruggeman rna-NM_001184516.1_Bruggeman cds-NP_690847.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:738239-738442:+ gene-YPR036W-A_CAT1 rna-NM_001184516.1_CAT1 cds-NP_690847.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:621310-621513:+ gene-YPR036W-A_CBS1585 rna-NM_001184516.1_CBS1585 cds-NP_690847.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:635682-635885:+ gene-YPR036W-A_CBS436 rna-NM_001184516.1_CBS436 cds-NP_690847.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:625058-625261:+ gene-YPR036W-A_CBS6412 rna-NM_001184516.1_CBS6412 cds-NP_690847.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:618259-618462:+ gene-YPR036W-A_CBS6413 rna-NM_001184516.1_CBS6413 cds-NP_690847.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:645925-646128:+ gene-YPR036W-A_CENPK1137D rna-NM_001184516.1_CENPK1137D cds-NP_690847.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:615554-615757:+ gene-YPR036W-A_EthanolRed rna-NM_001184516.1_EthanolRed cds-NP_690847.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:623357-623560:+ gene-YPR036W-A_FaliES1 rna-NM_001184516.1_FaliES1 cds-NP_690847.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000116.1:4349-4552:- gene-YPR036W-A_JAY291 rna-NM_001184516.1_JAY291 cds-NP_690847.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:636485-636688:+ gene-YPR036W-A_MUCL30387 rna-NM_001184516.1_MUCL30387 cds-NP_690847.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:635180-635383:+ gene-YPR036W-A_MUCL30388 rna-NM_001184516.1_MUCL30388 cds-NP_690847.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:614567-614770:+ gene-YPR036W-A_MUCL39482 rna-NM_001184516.1_MUCL39482 cds-NP_690847.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:677376-677579:+ gene-YPR036W-A_MUCL42920 rna-NM_001184516.1_MUCL42920 cds-NP_690847.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:645933-646136:+ gene-YPR036W-A_NCIM3186 rna-NM_001184516.1_NCIM3186 cds-NP_690847.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:622498-622701:+ gene-YPR036W-A_NCYC1407 rna-NM_001184516.1_NCYC1407 cds-NP_690847.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:628711-628914:+ gene-YPR036W-A_PE2H3 rna-NM_001184516.1_PE2H3 cds-NP_690847.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:628359-628562:+ gene-YPR036W-A_PE2H4 rna-NM_001184516.1_PE2H4 cds-NP_690847.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:645950-646153:+ gene-YPR036W-A_S288C rna-NM_001184516.1_S288C cds-NP_690847.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000026.1:54620-54823:- gene-YPR036W-A_SA1 rna-NM_001184516.1_SA1 cds-NP_690847.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:623157-623360:+ gene-YPR036W-A_ThermosaccDry rna-NM_001184516.1_ThermosaccDry cds-NP_690847.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:639372-639575:+ gene-YPR036W-A_VR1 rna-NM_001184516.1_VR1 cds-NP_690847.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:622475-622678:+ gene-YPR036W-A_ZTW1 rna-NM_001184516.1_ZTW1 cds-NP_690847.1_ZTW1 99.5 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:623236-623439:+ gene-YPR036W-A_Sparadoxus rna-NM_001184516.1_Sparadoxus cds-NP_690847.1_Sparadoxus 95.5 100.0 Verified 1 1 1 False True False False False

Additional files