Gene name: SPO22
Reference locus (S288C): YIL073C
Gene biotype: protein_coding
Description: Sporulation-specific protein 22; Meiosis-specific protein essential for chromosome synapsis; involved in completion of nuclear divisions during meiosis; induced early in meiosis
Top 10 interactors (score): SPO16 (0.99); MSH4 (0.989); HFM1 (0.972); CST9 (0.968); ZIP2 (0.965); MSH5 (0.955); ZIP1 (0.935); SPO11 (0.915); HOP1 (0.894); ECM11 (0.888); DMC1 (0.868); PCH2 (0.859); MLH3 (0.853); MND1 (0.851); MUS81 (0.844); MLH2 (0.843); MLH1 (0.826); SPO1 (0.817); MER1 (0.815); RED1 (0.794)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:219605-222622:- | gene-YIL073C_AKU4011 | rna-NM_001179423.1_AKU4011 | cds-NP_012192.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:81538-84555:- | gene-YIL073C_BG1 | rna-NM_001179423.1_BG1 | cds-NP_012192.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:225021-228038:- | gene-YIL073C_Bruggeman | rna-NM_001179423.1_Bruggeman | cds-NP_012192.2_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:215300-218317:- | gene-YIL073C_CAT1 | rna-NM_001179423.1_CAT1 | cds-NP_012192.2_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:219176-222193:- | gene-YIL073C_CBS1585 | rna-NM_001179423.1_CBS1585 | cds-NP_012192.2_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:215228-218245:- | gene-YIL073C_CBS436 | rna-NM_001179423.1_CBS436 | cds-NP_012192.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:216553-219570:- | gene-YIL073C_CBS6412 | rna-NM_001179423.1_CBS6412 | cds-NP_012192.2_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:211096-214113:- | gene-YIL073C_CBS6413 | rna-NM_001179423.1_CBS6413 | cds-NP_012192.2_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:214641-217658:- | gene-YIL073C_CENPK1137D | rna-NM_001179423.1_CENPK1137D | cds-NP_012192.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:203900-206917:- | gene-YIL073C_EthanolRed | rna-NM_001179423.1_EthanolRed | cds-NP_012192.2_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:220808-223825:- | gene-YIL073C_FaliES1 | rna-NM_001179423.1_FaliES1 | cds-NP_012192.2_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000025.1:5685-8702:+ | gene-YIL073C_JAY291 | rna-NM_001179423.1_JAY291 | cds-NP_012192.2_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:223238-226255:- | gene-YIL073C_MUCL30387 | rna-NM_001179423.1_MUCL30387 | cds-NP_012192.2_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:219847-222864:- | gene-YIL073C_MUCL30388 | rna-NM_001179423.1_MUCL30388 | cds-NP_012192.2_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:220023-223040:- | gene-YIL073C_MUCL39482 | rna-NM_001179423.1_MUCL39482 | cds-NP_012192.2_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:223385-226402:- | gene-YIL073C_MUCL42920 | rna-NM_001179423.1_MUCL42920 | cds-NP_012192.2_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:222937-225954:- | gene-YIL073C_NCIM3186 | rna-NM_001179423.1_NCIM3186 | cds-NP_012192.2_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:224300-227317:- | gene-YIL073C_NCYC1407 | rna-NM_001179423.1_NCYC1407 | cds-NP_012192.2_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:218282-221299:- | gene-YIL073C_PE2H3 | rna-NM_001179423.1_PE2H3 | cds-NP_012192.2_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:212999-216016:- | gene-YIL073C_PE2H4 | rna-NM_001179423.1_PE2H4 | cds-NP_012192.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:222937-225954:- | gene-YIL073C_S288C | rna-NM_001179423.1_S288C | cds-NP_012192.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:99880-102897:+ | gene-YIL073C_SA1 | rna-NM_001179423.1_SA1 | cds-NP_012192.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:219472-222489:- | gene-YIL073C_ThermosaccDry | rna-NM_001179423.1_ThermosaccDry | cds-NP_012192.2_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:217157-220174:- | gene-YIL073C_VR1 | rna-NM_001179423.1_VR1 | cds-NP_012192.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:193734-196751:- | gene-YIL073C_ZTW1 | rna-NM_001179423.1_ZTW1 | cds-NP_012192.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:217858-220891:- | gene-YIL073C_Sparadoxus | rna-NM_001179423.1_Sparadoxus | cds-NP_012192.2_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |