Gene name: SPO20
Reference locus (S288C): YMR017W
Gene biotype: protein_coding
Description: Sporulation-specific protein 20; Meiosis-specific subunit of the t-SNARE complex; required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; binds to phosphatidic acid; SNAP-25 homolog
Top 10 interactors (score): SSO1 (0.999); SNC1 (0.995); SEC1 (0.995); SSO2 (0.993); SEC17 (0.993); SNC2 (0.992); SEC22 (0.987); VAM3 (0.985); YKT6 (0.985); NYV1 (0.984); SEC4 (0.984); SED5 (0.981); UFE1 (0.968); PEP12 (0.953); BOS1 (0.952); GOS1 (0.952); SEC20 (0.946); SPO14 (0.943); SEC18 (0.942); SEC9 (0.941)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:357088-358281:+ | gene-YMR017W_AKU4011 | rna-NM_001182513.1_AKU4011 | cds-NP_013730.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:184568-185761:- | gene-YMR017W_BG1 | rna-NM_001182513.1_BG1 | cds-NP_013730.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:297032-298225:+ | gene-YMR017W_Bruggeman | rna-NM_001182513.1_Bruggeman | cds-NP_013730.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:299549-300742:+ | gene-YMR017W_CAT1 | rna-NM_001182513.1_CAT1 | cds-NP_013730.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:290029-291222:+ | gene-YMR017W_CBS1585 | rna-NM_001182513.1_CBS1585 | cds-NP_013730.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:295579-296772:+ | gene-YMR017W_CBS436 | rna-NM_001182513.1_CBS436 | cds-NP_013730.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:403433-404626:+ | gene-YMR017W_CBS6412 | rna-NM_001182513.1_CBS6412 | cds-NP_013730.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:289285-290478:+ | gene-YMR017W_CBS6413 | rna-NM_001182513.1_CBS6413 | cds-NP_013730.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:302220-303413:+ | gene-YMR017W_CENPK1137D | rna-NM_001182513.1_CENPK1137D | cds-NP_013730.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:289860-291053:+ | gene-YMR017W_EthanolRed | rna-NM_001182513.1_EthanolRed | cds-NP_013730.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:293043-294236:+ | gene-YMR017W_FaliES1 | rna-NM_001182513.1_FaliES1 | cds-NP_013730.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:142699-143892:- | gene-YMR017W_JAY291 | rna-NM_001182513.1_JAY291 | cds-NP_013730.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:294992-296185:+ | gene-YMR017W_MUCL30387 | rna-NM_001182513.1_MUCL30387 | cds-NP_013730.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:299417-300610:+ | gene-YMR017W_MUCL30388 | rna-NM_001182513.1_MUCL30388 | cds-NP_013730.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:290314-291507:+ | gene-YMR017W_MUCL39482 | rna-NM_001182513.1_MUCL39482 | cds-NP_013730.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:296124-297317:+ | gene-YMR017W_MUCL42920 | rna-NM_001182513.1_MUCL42920 | cds-NP_013730.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:307443-308636:+ | gene-YMR017W_NCIM3186 | rna-NM_001182513.1_NCIM3186 | cds-NP_013730.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:290231-291424:+ | gene-YMR017W_NCYC1407 | rna-NM_001182513.1_NCYC1407 | cds-NP_013730.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:296180-297373:+ | gene-YMR017W_PE2H3 | rna-NM_001182513.1_PE2H3 | cds-NP_013730.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:302275-303468:+ | gene-YMR017W_PE2H4 | rna-NM_001182513.1_PE2H4 | cds-NP_013730.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:307489-308682:+ | gene-YMR017W_S288C | rna-NM_001182513.1_S288C | cds-NP_013730.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:229584-230777:- | gene-YMR017W_SA1 | rna-NM_001182513.1_SA1 | cds-NP_013730.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:290112-291305:+ | gene-YMR017W_ThermosaccDry | rna-NM_001182513.1_ThermosaccDry | cds-NP_013730.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:294068-295261:+ | gene-YMR017W_VR1 | rna-NM_001182513.1_VR1 | cds-NP_013730.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:269133-270326:+ | gene-YMR017W_ZTW1 | rna-NM_001182513.1_ZTW1 | cds-NP_013730.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:303022-304203:+ | gene-YMR017W_Sparadoxus | rna-NM_001182513.1_Sparadoxus | cds-NP_013730.1_Sparadoxus | 84.2 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |