SPO19 (YPL130W)


Gene profile

Gene name: SPO19
Reference locus (S288C): YPL130W
Gene biotype: protein_coding

Description: Sporulation-specific protein 19; Meiosis-specific prospore protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation; identified as a weak high-copy suppressor of the spo1-1 ts mutation; SPO19 has a paralog, YOR214C, that arose from the whole genome duplication

Top 10 interactors (score): PAU12 (0.746); PAU17 (0.745); DON1 (0.711); SSP1 (0.705); YLR053C (0.7); KRE9 (0.692); PAN2 (0.69); SPO1 (0.679); PAU5 (0.619); PAU24 (0.616); IES3 (0.574); PIR1 (0.499); FLO10 (0.483); RNH201 (0.483); PIR3 (0.482); SAG1 (0.481); TAF14 (0.469); SPO22 (0.452); DSE4 (0.45); CRH1 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:282041-282712:+ gene-YPL130W_AKU4011 rna-NM_001183944.1_AKU4011 cds-NP_015195.1_AKU4011 98.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:487727-488398:+ gene-YPL130W_BG1 rna-NM_001183944.1_BG1 cds-NP_015195.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:308040-308711:+ gene-YPL130W_Bruggeman rna-NM_001183944.1_Bruggeman cds-NP_015195.1_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:304711-305382:+ gene-YPL130W_CAT1 rna-NM_001183944.1_CAT1 cds-NP_015195.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:286114-286785:+ gene-YPL130W_CBS1585 rna-NM_001183944.1_CBS1585 cds-NP_015195.1_CBS1585 98.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:300777-301448:+ gene-YPL130W_CBS436 rna-NM_001183944.1_CBS436 cds-NP_015195.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:290783-291454:+ gene-YPL130W_CBS6412 rna-NM_001183944.1_CBS6412 cds-NP_015195.1_CBS6412 98.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:282750-283421:+ gene-YPL130W_CBS6413 rna-NM_001183944.1_CBS6413 cds-NP_015195.1_CBS6413 98.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:304289-304960:+ gene-YPL130W_CENPK1137D rna-NM_001183944.1_CENPK1137D cds-NP_015195.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:280729-281400:+ gene-YPL130W_EthanolRed rna-NM_001183944.1_EthanolRed cds-NP_015195.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:288321-288992:+ gene-YPL130W_FaliES1 rna-NM_001183944.1_FaliES1 cds-NP_015195.1_FaliES1 98.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:76857-77528:- gene-YPL130W_JAY291 rna-NM_001183944.1_JAY291 cds-NP_015195.1_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:299284-299955:+ gene-YPL130W_MUCL30387 rna-NM_001183944.1_MUCL30387 cds-NP_015195.1_MUCL30387 98.9 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:297293-297964:+ gene-YPL130W_MUCL30388 rna-NM_001183944.1_MUCL30388 cds-NP_015195.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:279443-280114:+ gene-YPL130W_MUCL39482 rna-NM_001183944.1_MUCL39482 cds-NP_015195.1_MUCL39482 98.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:336681-337352:+ gene-YPL130W_MUCL42920 rna-NM_001183944.1_MUCL42920 cds-NP_015195.1_MUCL42920 99.1 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:304370-305041:+ gene-YPL130W_NCIM3186 rna-NM_001183944.1_NCIM3186 cds-NP_015195.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:285896-286567:+ gene-YPL130W_NCYC1407 rna-NM_001183944.1_NCYC1407 cds-NP_015195.1_NCYC1407 98.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:293354-294025:+ gene-YPL130W_PE2H3 rna-NM_001183944.1_PE2H3 cds-NP_015195.1_PE2H3 98.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:292976-293647:+ gene-YPL130W_PE2H4 rna-NM_001183944.1_PE2H4 cds-NP_015195.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:304387-305058:+ gene-YPL130W_S288C rna-NM_001183944.1_S288C cds-NP_015195.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:68622-69293:- gene-YPL130W_SA1 rna-NM_001183944.1_SA1 cds-NP_015195.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:288119-288790:+ gene-YPL130W_ThermosaccDry rna-NM_001183944.1_ThermosaccDry cds-NP_015195.1_ThermosaccDry 98.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:303096-303767:+ gene-YPL130W_VR1 rna-NM_001183944.1_VR1 cds-NP_015195.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:287444-288115:+ gene-YPL130W_ZTW1 rna-NM_001183944.1_ZTW1 cds-NP_015195.1_ZTW1 98.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:289153-289821:+ gene-YPL130W_Sparadoxus rna-NM_001183944.1_Sparadoxus cds-NP_015195.1_Sparadoxus 86.3 99.4 Verified 1 1 1 False True False False False

Additional files