Gene name: SPO13
Reference locus (S288C): YHR014W
Gene biotype: protein_coding
Description: Meiosis-specific protein SPO13; Meiotic regulator; involved in maintaining sister chromatid cohesion during meiosis I as well as promoting proper attachment of kinetochores to the spindle during meiosis I and meiosis II; anaphase-promoting complex (APC) substrate that is degraded during anaphase I; expressed only in meiotic cells
Top 10 interactors (score): SPO11 (0.961); MEK1 (0.853); RED1 (0.822); MAM1 (0.821); REC107 (0.817); REC104 (0.813); HOP1 (0.813); CDC5 (0.787); REC114 (0.786); REC102 (0.78); SPO12 (0.776); IME1 (0.774); SGO1 (0.764); IME2 (0.749); REC8 (0.715); MER1 (0.713); SPS2 (0.711); MEI4 (0.695); ESP1 (0.684); PDS1 (0.674)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:120336-121211:+ | gene-YHR014W_AKU4011 | rna-NM_001179144.1_AKU4011 | cds-NP_011878.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:40132-41007:+ | gene-YHR014W_BG1 | rna-NM_001179144.1_BG1 | cds-NP_011878.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:127169-128044:+ | gene-YHR014W_Bruggeman | rna-NM_001179144.1_Bruggeman | cds-NP_011878.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:121400-122275:+ | gene-YHR014W_CAT1 | rna-NM_001179144.1_CAT1 | cds-NP_011878.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:120921-121796:+ | gene-YHR014W_CBS1585 | rna-NM_001179144.1_CBS1585 | cds-NP_011878.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:113736-114611:+ | gene-YHR014W_CBS436 | rna-NM_001179144.1_CBS436 | cds-NP_011878.1_CBS436 | 99.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:120518-121393:+ | gene-YHR014W_CBS6412 | rna-NM_001179144.1_CBS6412 | cds-NP_011878.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:120254-121129:+ | gene-YHR014W_CBS6413 | rna-NM_001179144.1_CBS6413 | cds-NP_011878.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:125207-126082:+ | gene-YHR014W_CENPK1137D | rna-NM_001179144.1_CENPK1137D | cds-NP_011878.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:120135-121010:+ | gene-YHR014W_EthanolRed | rna-NM_001179144.1_EthanolRed | cds-NP_011878.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:121113-121988:+ | gene-YHR014W_FaliES1 | rna-NM_001179144.1_FaliES1 | cds-NP_011878.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000064.1:237-1112:- | gene-YHR014W_JAY291 | rna-NM_001179144.1_JAY291 | cds-NP_011878.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:125715-126590:+ | gene-YHR014W_MUCL30387 | rna-NM_001179144.1_MUCL30387 | cds-NP_011878.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:126593-127425:+ | gene-YHR014W_MUCL30388 | rna-NM_001179144.1_MUCL30388 | cds-NP_011878.1_MUCL30388 | 92.8 | 95.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:119948-120823:+ | gene-YHR014W_MUCL39482 | rna-NM_001179144.1_MUCL39482 | cds-NP_011878.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:124760-125635:+ | gene-YHR014W_MUCL42920 | rna-NM_001179144.1_MUCL42920 | cds-NP_011878.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:131929-132804:+ | gene-YHR014W_NCIM3186 | rna-NM_001179144.1_NCIM3186 | cds-NP_011878.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:119362-120237:+ | gene-YHR014W_NCYC1407 | rna-NM_001179144.1_NCYC1407 | cds-NP_011878.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:121561-122436:+ | gene-YHR014W_PE2H3 | rna-NM_001179144.1_PE2H3 | cds-NP_011878.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:129002-129877:+ | gene-YHR014W_PE2H4 | rna-NM_001179144.1_PE2H4 | cds-NP_011878.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:132047-132922:+ | gene-YHR014W_S288C | rna-NM_001179144.1_S288C | cds-NP_011878.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:13955-14830:- | gene-YHR014W_SA1 | rna-NM_001179144.1_SA1 | cds-NP_011878.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:122202-123077:+ | gene-YHR014W_ThermosaccDry | rna-NM_001179144.1_ThermosaccDry | cds-NP_011878.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:127724-128599:+ | gene-YHR014W_VR1 | rna-NM_001179144.1_VR1 | cds-NP_011878.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:113439-114314:+ | gene-YHR014W_ZTW1 | rna-NM_001179144.1_ZTW1 | cds-NP_011878.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:119842-120717:+ | gene-YHR014W_Sparadoxus | rna-NM_001179144.1_Sparadoxus | cds-NP_011878.1_Sparadoxus | 86.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |