Gene name: SPI1
Reference locus (S288C): YER150W
Gene biotype: protein_coding
Description: GPI-anchored cell wall protein involved in weak acid resistance; basal expression requires Msn2p/Msn4p; expression is induced under conditions of stress and during the diauxic shift; SPI1 has a paralog, SED1, that arose from the whole genome duplication; Belongs to the SED1 family
Top 10 interactors (score): YGP1 (0.958); RTC3 (0.947); SOL4 (0.93); SED1 (0.93); GAD1 (0.922); TFS1 (0.922); MSC1 (0.922); DDR2 (0.921); PGM2 (0.902); CTT1 (0.899); SSE2 (0.893); HSP26 (0.889); TSL1 (0.876); ALD3 (0.874); HSP42 (0.874); HOR7 (0.864); STF2 (0.838); DCS2 (0.834); PIC2 (0.802); GLK1 (0.802)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:455875-456321:+ | gene-YER150W_AKU4011 | rna-NM_001179040.1_AKU4011 | cds-NP_011077.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:88240-88686:- | gene-YER150W_BG1 | rna-NM_001179040.1_BG1 | cds-NP_011077.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:467164-467610:+ | gene-YER150W_Bruggeman | rna-NM_001179040.1_Bruggeman | cds-NP_011077.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:454998-455444:+ | gene-YER150W_CAT1 | rna-NM_001179040.1_CAT1 | cds-NP_011077.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:455692-456138:+ | gene-YER150W_CBS1585 | rna-NM_001179040.1_CBS1585 | cds-NP_011077.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:459499-459945:+ | gene-YER150W_CBS436 | rna-NM_001179040.1_CBS436 | cds-NP_011077.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:454205-454651:+ | gene-YER150W_CBS6412 | rna-NM_001179040.1_CBS6412 | cds-NP_011077.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:461751-462197:+ | gene-YER150W_CBS6413 | rna-NM_001179040.1_CBS6413 | cds-NP_011077.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:466143-466589:+ | gene-YER150W_CENPK1137D | rna-NM_001179040.1_CENPK1137D | cds-NP_011077.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:462164-462610:+ | gene-YER150W_EthanolRed | rna-NM_001179040.1_EthanolRed | cds-NP_011077.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:462750-463196:+ | gene-YER150W_FaliES1 | rna-NM_001179040.1_FaliES1 | cds-NP_011077.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000111.1:23292-23738:- | gene-YER150W_JAY291 | rna-NM_001179040.1_JAY291 | cds-NP_011077.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:455905-456351:+ | gene-YER150W_MUCL30387 | rna-NM_001179040.1_MUCL30387 | cds-NP_011077.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:458804-459250:+ | gene-YER150W_MUCL30388 | rna-NM_001179040.1_MUCL30388 | cds-NP_011077.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:451644-452090:+ | gene-YER150W_MUCL39482 | rna-NM_001179040.1_MUCL39482 | cds-NP_011077.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:463723-464169:+ | gene-YER150W_MUCL42920 | rna-NM_001179040.1_MUCL42920 | cds-NP_011077.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:468369-468815:+ | gene-YER150W_NCIM3186 | rna-NM_001179040.1_NCIM3186 | cds-NP_011077.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:461115-461561:+ | gene-YER150W_NCYC1407 | rna-NM_001179040.1_NCYC1407 | cds-NP_011077.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:476800-477246:+ | gene-YER150W_PE2H3 | rna-NM_001179040.1_PE2H3 | cds-NP_011077.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:466741-467187:+ | gene-YER150W_PE2H4 | rna-NM_001179040.1_PE2H4 | cds-NP_011077.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:468370-468816:+ | gene-YER150W_S288C | rna-NM_001179040.1_S288C | cds-NP_011077.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:26270-26716:+ | gene-YER150W_SA1 | rna-NM_001179040.1_SA1 | cds-NP_011077.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:463550-463996:+ | gene-YER150W_ThermosaccDry | rna-NM_001179040.1_ThermosaccDry | cds-NP_011077.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:456664-457110:+ | gene-YER150W_VR1 | rna-NM_001179040.1_VR1 | cds-NP_011077.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000010.1:18505-18951:+ | gene-YER150W_ZTW1 | rna-NM_001179040.1_ZTW1 | cds-NP_011077.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:464390-464836:+ | gene-YER150W_Sparadoxus | rna-NM_001179040.1_Sparadoxus | cds-NP_011077.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |