Gene name: SPH1
Reference locus (S288C): YLR313C
Gene biotype: protein_coding
Description: Protein involved in shmoo formation and bipolar bud site selection; localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p; SPH1 has a paralog, SPA2, that arose from the whole genome duplication
Top 10 interactors (score): YNL234W (0.711); BUD6 (0.71); RDI1 (0.613); HMRA2 (0.574); RGA1 (0.572); IOC2 (0.563); WSC2 (0.562); FKS1 (0.525); GIC2 (0.485); STE11 (0.459); MKK2 (0.457); MID2 (0.454); YGL235W (0.451); BEM1 (0.45); BEM2 (0.45); YPI1 (0.45); MKK1 (0.438)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:709202-710792:- | gene-YLR313C_AKU4011 | rna-NM_001182202.2_AKU4011 | cds-NP_013417.3_AKU4011 | 99.1 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:21849-23439:+ | gene-YLR313C_BG1 | rna-NM_001182202.2_BG1 | cds-NP_013417.3_BG1 | 98.7 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:745034-746624:- | gene-YLR313C_Bruggeman | rna-NM_001182202.2_Bruggeman | cds-NP_013417.3_Bruggeman | 99.4 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:743204-744794:- | gene-YLR313C_CAT1 | rna-NM_001182202.2_CAT1 | cds-NP_013417.3_CAT1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:744129-745719:- | gene-YLR313C_CBS1585 | rna-NM_001182202.2_CBS1585 | cds-NP_013417.3_CBS1585 | 99.1 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:728728-730319:- | gene-YLR313C_CBS436 | rna-NM_001182202.2_CBS436 | cds-NP_013417.3_CBS436 | 98.8 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:706770-708360:- | gene-YLR313C_CBS6412 | rna-NM_001182202.2_CBS6412 | cds-NP_013417.3_CBS6412 | 99.1 | 99.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:744791-746381:- | gene-YLR313C_CBS6413 | rna-NM_001182202.2_CBS6413 | cds-NP_013417.3_CBS6413 | 99.1 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:745361-746953:- | gene-YLR313C_CENPK1137D | rna-NM_001182202.2_CENPK1137D | cds-NP_013417.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:702482-704072:- | gene-YLR313C_EthanolRed | rna-NM_001182202.2_EthanolRed | cds-NP_013417.3_EthanolRed | 99.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:731682-733272:- | gene-YLR313C_FaliES1 | rna-NM_001182202.2_FaliES1 | cds-NP_013417.3_FaliES1 | 99.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:34567-36157:+ | gene-YLR313C_JAY291 | rna-NM_001182202.2_JAY291 | cds-NP_013417.3_JAY291 | 98.7 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:744263-745853:- | gene-YLR313C_MUCL30387 | rna-NM_001182202.2_MUCL30387 | cds-NP_013417.3_MUCL30387 | 99.0 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:749846-751436:- | gene-YLR313C_MUCL30388 | rna-NM_001182202.2_MUCL30388 | cds-NP_013417.3_MUCL30388 | 99.0 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:745359-746949:- | gene-YLR313C_MUCL39482 | rna-NM_001182202.2_MUCL39482 | cds-NP_013417.3_MUCL39482 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:740512-742102:- | gene-YLR313C_MUCL42920 | rna-NM_001182202.2_MUCL42920 | cds-NP_013417.3_MUCL42920 | 99.0 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:760724-762316:- | gene-YLR313C_NCIM3186 | rna-NM_001182202.2_NCIM3186 | cds-NP_013417.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:754701-756291:- | gene-YLR313C_NCYC1407 | rna-NM_001182202.2_NCYC1407 | cds-NP_013417.3_NCYC1407 | 99.7 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:742496-744086:- | gene-YLR313C_PE2H3 | rna-NM_001182202.2_PE2H3 | cds-NP_013417.3_PE2H3 | 98.7 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:742240-743830:- | gene-YLR313C_PE2H4 | rna-NM_001182202.2_PE2H4 | cds-NP_013417.3_PE2H4 | 98.7 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:760750-762342:- | gene-YLR313C_S288C | rna-NM_001182202.2_S288C | cds-NP_013417.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:21957-23547:+ | gene-YLR313C_SA1 | rna-NM_001182202.2_SA1 | cds-NP_013417.3_SA1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:733576-735166:- | gene-YLR313C_ThermosaccDry | rna-NM_001182202.2_ThermosaccDry | cds-NP_013417.3_ThermosaccDry | 99.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:745712-747302:- | gene-YLR313C_VR1 | rna-NM_001182202.2_VR1 | cds-NP_013417.3_VR1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:71997-73587:- | gene-YLR313C_ZTW1 | rna-NM_001182202.2_ZTW1 | cds-NP_013417.3_ZTW1 | 99.6 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:719748-721341:- | gene-YLR313C_Sparadoxus | rna-NM_001182202.2_Sparadoxus | cds-NP_013417.3_Sparadoxus | 81.3 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |