Gene name: SPC98
Reference locus (S288C): YNL126W
Gene biotype: protein_coding
Description: Spindle pole body component SPC98; Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque
Top 10 interactors (score): SPC97 (0.999); TUB4 (0.999); SPC110 (0.993); SPC72 (0.98); ACT1 (0.968); CDC31 (0.958); TUB1 (0.952); TUB2 (0.952); SPC42 (0.938); MPS1 (0.931); TUB3 (0.923); NDC80 (0.918); BIM1 (0.914); POL1 (0.905); CDC6 (0.9); MCM4 (0.896); MCD1 (0.895); SMC2 (0.888); MCM5 (0.883); POL2 (0.882)
Homologues (species, bitscore): TUBGCP3 (Homo sapiens, 140.6); Tubgcp3 (Mus musculus, 140.2); tubgcp3 (Danio rerio, 138.7); tubgcp3 (Xenopus tropicalis, 130.6); Grip91 (Drosophila melanogaster, 127.9); SPC98 (Arabidopsis thaliana, 149.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:380911-383451:+ | gene-YNL126W_AKU4011 | rna-NM_001182964.1_AKU4011 | cds-NP_014273.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:284905-287445:+ | gene-YNL126W_BG1 | rna-NM_001182964.1_BG1 | cds-NP_014273.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:391006-393546:+ | gene-YNL126W_Bruggeman | rna-NM_001182964.1_Bruggeman | cds-NP_014273.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:434207-436747:+ | gene-YNL126W_CAT1 | rna-NM_001182964.1_CAT1 | cds-NP_014273.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:381531-384071:+ | gene-YNL126W_CBS1585 | rna-NM_001182964.1_CBS1585 | cds-NP_014273.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:449922-452462:+ | gene-YNL126W_CBS436 | rna-NM_001182964.1_CBS436 | cds-NP_014273.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:376984-379524:+ | gene-YNL126W_CBS6412 | rna-NM_001182964.1_CBS6412 | cds-NP_014273.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:377949-380489:+ | gene-YNL126W_CBS6413 | rna-NM_001182964.1_CBS6413 | cds-NP_014273.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:381077-383617:+ | gene-YNL126W_CENPK1137D | rna-NM_001182964.1_CENPK1137D | cds-NP_014273.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:377901-380441:+ | gene-YNL126W_EthanolRed | rna-NM_001182964.1_EthanolRed | cds-NP_014273.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:373803-376343:+ | gene-YNL126W_FaliES1 | rna-NM_001182964.1_FaliES1 | cds-NP_014273.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:30181-32721:+ | gene-YNL126W_JAY291 | rna-NM_001182964.1_JAY291 | cds-NP_014273.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:387022-389562:+ | gene-YNL126W_MUCL30387 | rna-NM_001182964.1_MUCL30387 | cds-NP_014273.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:422135-424675:+ | gene-YNL126W_MUCL30388 | rna-NM_001182964.1_MUCL30388 | cds-NP_014273.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:378810-381350:+ | gene-YNL126W_MUCL39482 | rna-NM_001182964.1_MUCL39482 | cds-NP_014273.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:381800-384340:+ | gene-YNL126W_MUCL42920 | rna-NM_001182964.1_MUCL42920 | cds-NP_014273.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:387196-389736:+ | gene-YNL126W_NCIM3186 | rna-NM_001182964.1_NCIM3186 | cds-NP_014273.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:380942-383482:+ | gene-YNL126W_NCYC1407 | rna-NM_001182964.1_NCYC1407 | cds-NP_014273.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:379930-382470:+ | gene-YNL126W_PE2H3 | rna-NM_001182964.1_PE2H3 | cds-NP_014273.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:379318-381858:+ | gene-YNL126W_PE2H4 | rna-NM_001182964.1_PE2H4 | cds-NP_014273.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:387227-389767:+ | gene-YNL126W_S288C | rna-NM_001182964.1_S288C | cds-NP_014273.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:23747-26287:- | gene-YNL126W_SA1 | rna-NM_001182964.1_SA1 | cds-NP_014273.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:374657-377197:+ | gene-YNL126W_ThermosaccDry | rna-NM_001182964.1_ThermosaccDry | cds-NP_014273.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:393317-395857:+ | gene-YNL126W_VR1 | rna-NM_001182964.1_VR1 | cds-NP_014273.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:284491-287030:+ | gene-YNL126W_ZTW1 | rna-NM_001182964.1_ZTW1 | cds-NP_014273.1_ZTW1 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:385451-387991:+ | gene-YNL126W_Sparadoxus | rna-NM_001182964.1_Sparadoxus | cds-NP_014273.1_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |