Gene name: SPC34
Reference locus (S288C): YKR037C
Gene biotype: protein_coding
Description: Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body
Top 10 interactors (score): DUO1 (0.999); ASK1 (0.999); SPC19 (0.999); DAM1 (0.999); DAD1 (0.999); DAD2 (0.998); DAD4 (0.998); DAD3 (0.998); HSK3 (0.997); CHL4 (0.95); NDC80 (0.941); IML3 (0.928); IPL1 (0.907); NUF2 (0.895); DSN1 (0.868); SLI15 (0.831); SPC25 (0.826); CTF3 (0.81); SPC24 (0.76); MCM22 (0.758)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:496584-497471:- | gene-YKR037C_AKU4011 | rna-NM_001179827.3_AKU4011 | cds-NP_012963.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:146004-146891:+ | gene-YKR037C_BG1 | rna-NM_001179827.3_BG1 | cds-NP_012963.3_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:518764-519651:- | gene-YKR037C_Bruggeman | rna-NM_001179827.3_Bruggeman | cds-NP_012963.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:514013-514900:- | gene-YKR037C_CAT1 | rna-NM_001179827.3_CAT1 | cds-NP_012963.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:509324-510211:- | gene-YKR037C_CBS1585 | rna-NM_001179827.3_CBS1585 | cds-NP_012963.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:508167-509054:- | gene-YKR037C_CBS436 | rna-NM_001179827.3_CBS436 | cds-NP_012963.3_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:493485-494372:- | gene-YKR037C_CBS6412 | rna-NM_001179827.3_CBS6412 | cds-NP_012963.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:509153-510040:- | gene-YKR037C_CBS6413 | rna-NM_001179827.3_CBS6413 | cds-NP_012963.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:510688-511609:- | gene-YKR037C_CENPK1137D | rna-NM_001179827.3_CENPK1137D | cds-NP_012963.3_CENPK1137D | 93.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:506850-507737:- | gene-YKR037C_EthanolRed | rna-NM_001179827.3_EthanolRed | cds-NP_012963.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:509983-510870:- | gene-YKR037C_FaliES1 | rna-NM_001179827.3_FaliES1 | cds-NP_012963.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:42874-43761:+ | gene-YKR037C_JAY291 | rna-NM_001179827.3_JAY291 | cds-NP_012963.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:518913-519800:- | gene-YKR037C_MUCL30387 | rna-NM_001179827.3_MUCL30387 | cds-NP_012963.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:513522-514409:- | gene-YKR037C_MUCL30388 | rna-NM_001179827.3_MUCL30388 | cds-NP_012963.3_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:508642-509529:- | gene-YKR037C_MUCL39482 | rna-NM_001179827.3_MUCL39482 | cds-NP_012963.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:514675-515562:- | gene-YKR037C_MUCL42920 | rna-NM_001179827.3_MUCL42920 | cds-NP_012963.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:510899-511786:- | gene-YKR037C_NCIM3186 | rna-NM_001179827.3_NCIM3186 | cds-NP_012963.3_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:508848-509735:- | gene-YKR037C_NCYC1407 | rna-NM_001179827.3_NCYC1407 | cds-NP_012963.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:533850-534737:- | gene-YKR037C_PE2H3 | rna-NM_001179827.3_PE2H3 | cds-NP_012963.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:518573-519460:- | gene-YKR037C_PE2H4 | rna-NM_001179827.3_PE2H4 | cds-NP_012963.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:510910-511797:- | gene-YKR037C_S288C | rna-NM_001179827.3_S288C | cds-NP_012963.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000078.1:1939-2826:+ | gene-YKR037C_SA1 | rna-NM_001179827.3_SA1 | cds-NP_012963.3_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:509236-510123:- | gene-YKR037C_ThermosaccDry | rna-NM_001179827.3_ThermosaccDry | cds-NP_012963.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:508871-509758:- | gene-YKR037C_VR1 | rna-NM_001179827.3_VR1 | cds-NP_012963.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:507283-508170:- | gene-YKR037C_ZTW1 | rna-NM_001179827.3_ZTW1 | cds-NP_012963.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:532569-533456:- | gene-YKR037C_Sparadoxus | rna-NM_001179827.3_Sparadoxus | cds-NP_012963.3_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |