SOV1 (YMR066W)


Gene profile

Gene name: SOV1
Reference locus (S288C): YMR066W
Gene biotype: protein_coding

Description: Protein sov1, mitochondrial; Mitochondrial protein of unknown function

Top 10 interactors (score): MRPL25 (0.748); OPI8 (0.747); YGL260W (0.716); YHL005C (0.716); ATP22 (0.715); RMD9 (0.712); MRX1 (0.712); MRPS12 (0.705); IMG2 (0.698); AEP3 (0.69); MSC6 (0.676); YGR122W (0.673); PUF3 (0.669); CCM1 (0.62); PET111 (0.619); INA22 (0.617); MRX14 (0.614); MRPL40 (0.592); MRPL33 (0.575); MSK1 (0.575)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:439254-441950:+ gene-YMR066W_AKU4011 rna-NM_001182564.1_AKU4011 cds-NP_013782.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:100834-103530:- gene-YMR066W_BG1 rna-NM_001182564.1_BG1 cds-NP_013782.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:381419-384115:+ gene-YMR066W_Bruggeman rna-NM_001182564.1_Bruggeman cds-NP_013782.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:381760-384456:+ gene-YMR066W_CAT1 rna-NM_001182564.1_CAT1 cds-NP_013782.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:372197-374893:+ gene-YMR066W_CBS1585 rna-NM_001182564.1_CBS1585 cds-NP_013782.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:377752-380448:+ gene-YMR066W_CBS436 rna-NM_001182564.1_CBS436 cds-NP_013782.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:485597-488293:+ gene-YMR066W_CBS6412 rna-NM_001182564.1_CBS6412 cds-NP_013782.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:371454-374150:+ gene-YMR066W_CBS6413 rna-NM_001182564.1_CBS6413 cds-NP_013782.1_CBS6413 99.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:395653-398349:+ gene-YMR066W_CENPK1137D rna-NM_001182564.1_CENPK1137D cds-NP_013782.1_CENPK1137D 99.4 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:372049-374745:+ gene-YMR066W_EthanolRed rna-NM_001182564.1_EthanolRed cds-NP_013782.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:375218-377914:+ gene-YMR066W_FaliES1 rna-NM_001182564.1_FaliES1 cds-NP_013782.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:59030-61726:- gene-YMR066W_JAY291 rna-NM_001182564.1_JAY291 cds-NP_013782.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:377162-379858:+ gene-YMR066W_MUCL30387 rna-NM_001182564.1_MUCL30387 cds-NP_013782.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:381832-384528:+ gene-YMR066W_MUCL30388 rna-NM_001182564.1_MUCL30388 cds-NP_013782.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:372485-375181:+ gene-YMR066W_MUCL39482 rna-NM_001182564.1_MUCL39482 cds-NP_013782.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:379141-381837:+ gene-YMR066W_MUCL42920 rna-NM_001182564.1_MUCL42920 cds-NP_013782.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:401495-404191:+ gene-YMR066W_NCIM3186 rna-NM_001182564.1_NCIM3186 cds-NP_013782.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:372397-375093:+ gene-YMR066W_NCYC1407 rna-NM_001182564.1_NCYC1407 cds-NP_013782.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:378349-381045:+ gene-YMR066W_PE2H3 rna-NM_001182564.1_PE2H3 cds-NP_013782.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:384444-387140:+ gene-YMR066W_PE2H4 rna-NM_001182564.1_PE2H4 cds-NP_013782.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:401541-404237:+ gene-YMR066W_S288C rna-NM_001182564.1_S288C cds-NP_013782.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:145910-148606:- gene-YMR066W_SA1 rna-NM_001182564.1_SA1 cds-NP_013782.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:373021-375717:+ gene-YMR066W_ThermosaccDry rna-NM_001182564.1_ThermosaccDry cds-NP_013782.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:384934-387630:+ gene-YMR066W_VR1 rna-NM_001182564.1_VR1 cds-NP_013782.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:351301-353997:+ gene-YMR066W_ZTW1 rna-NM_001182564.1_ZTW1 cds-NP_013782.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:384907-387603:+ gene-YMR066W_Sparadoxus rna-NM_001182564.1_Sparadoxus cds-NP_013782.1_Sparadoxus 86.8 99.7 Verified 1 1 1 False True False False False

Additional files