Gene name: SOR1
Reference locus (S288C): YJR159W
Gene biotype: protein_coding
Description: L-iditol 2-dehydrogenase sor1; Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor2p sorbitol dehydrogenase; expression is induced in the presence of sorbitol or xylose
Top 10 interactors (score): GRE3 (0.993); SOR2 (0.986); XKS1 (0.942); DSF1 (0.909); YPR1 (0.857); TAL1 (0.797); MPH2 (0.784); RKI1 (0.777); MPH3 (0.761); YJL028W (0.744); FMP33 (0.744); YJL022W (0.744); YJL027C (0.744); HXK2 (0.744); GCY1 (0.741); HXT15 (0.736); HXK1 (0.725); GLK1 (0.721); YJR096W (0.719); HIT1 (0.714)
Homologues (species, bitscore): SORD (Homo sapiens, 284.3); Sord (Mus musculus, 287.7); LOC570613 (Danio rerio, 300.4); sord (Xenopus tropicalis, 303.9); Sodh-1 (Drosophila melanogaster, 310.5); R04B5.5 (Caenorhabditis elegans, 283.5); AT5G51970 (Arabidopsis thaliana, 265.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:6896-7969:- | gene-YJR159W_Bruggeman | rna-NM_001181817.1_Bruggeman | cds-NP_012693.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:728439-729512:+ | gene-YJR159W_CAT1 | rna-NM_001181817.1_CAT1 | cds-NP_012693.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:7742-8815:- | gene-YJR159W_CBS436 | rna-NM_001181817.1_CBS436 | cds-NP_012693.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:6270-7343:- | gene-YJR159W_EthanolRed | rna-NM_001181817.1_EthanolRed | cds-NP_012693.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:725440-726513:+ | gene-YJR159W_FaliES1 | rna-NM_001181817.1_FaliES1 | cds-NP_012693.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:6821-7894:- | gene-YJR159W_MUCL30387 | rna-NM_001181817.1_MUCL30387 | cds-NP_012693.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:721881-722954:+ | gene-YJR159W_MUCL30388 | rna-NM_001181817.1_MUCL30388 | cds-NP_012693.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:6773-7846:- | gene-YJR159W_MUCL42920 | rna-NM_001181817.1_MUCL42920 | cds-NP_012693.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:736023-737096:+ | gene-YJR159W_NCIM3186 | rna-NM_001181817.1_NCIM3186 | cds-NP_012693.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:736044-737117:+ | gene-YJR159W_S288C | rna-NM_001181817.1_S288C | cds-NP_012693.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:719136-720209:+ | gene-YJR159W_ThermosaccDry | rna-NM_001181817.1_ThermosaccDry | cds-NP_012693.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:7873-8947:- | gene-YJR159W_ZTW1 | rna-NM_001181817.1_ZTW1 | cds-NP_012693.1_ZTW1 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:10895-11968:- | gene-YJR159W_Sparadoxus | rna-NM_001181817.1_Sparadoxus | cds-NP_012693.1_Sparadoxus | 90.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |