Gene name: SOL1
Reference locus (S288C): YNR034W
Gene biotype: protein_coding
Description: 6-phosphogluconolactonase-like protein 1; Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL1 has a paralog, SOL2, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily
Top 10 interactors (score): ZWF1 (0.997); GND1 (0.979); GND2 (0.969); YDR248C (0.955); LOS1 (0.954); ADE16 (0.823); SOL2 (0.81); TKL2 (0.74); ADE17 (0.735); TAL1 (0.714); TKL1 (0.708); RPE1 (0.683); GAC1 (0.667); GAL10 (0.653); REG1 (0.636); CRT10 (0.622); RKI1 (0.621); YMR206W (0.615); SLM2 (0.614); STE23 (0.611)
Homologues (species, bitscore): PGLS (Homo sapiens, 130.6); Pgls (Mus musculus, 127.9); pgls (Danio rerio, 146.0); pgls (Xenopus tropicalis, 84.7); CG17333 (Drosophila melanogaster, 123.6); Y57G11C.3 (Caenorhabditis elegans, 92.4); EMB2024 (Arabidopsis thaliana, 116.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:673961-674926:+ | gene-YNR034W_AKU4011 | rna-NM_001183211.3_AKU4011 | cds-NP_014432.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:581830-582795:+ | gene-YNR034W_BG1 | rna-NM_001183211.3_BG1 | cds-NP_014432.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:691417-692382:+ | gene-YNR034W_Bruggeman | rna-NM_001183211.3_Bruggeman | cds-NP_014432.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:725675-726640:+ | gene-YNR034W_CAT1 | rna-NM_001183211.3_CAT1 | cds-NP_014432.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:679715-680680:+ | gene-YNR034W_CBS1585 | rna-NM_001183211.3_CBS1585 | cds-NP_014432.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:741387-742352:+ | gene-YNR034W_CBS436 | rna-NM_001183211.3_CBS436 | cds-NP_014432.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:668903-669868:+ | gene-YNR034W_CBS6412 | rna-NM_001183211.3_CBS6412 | cds-NP_014432.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:670609-671574:+ | gene-YNR034W_CBS6413 | rna-NM_001183211.3_CBS6413 | cds-NP_014432.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:684070-685035:+ | gene-YNR034W_CENPK1137D | rna-NM_001183211.3_CENPK1137D | cds-NP_014432.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:675654-676619:+ | gene-YNR034W_EthanolRed | rna-NM_001183211.3_EthanolRed | cds-NP_014432.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:666857-667822:+ | gene-YNR034W_FaliES1 | rna-NM_001183211.3_FaliES1 | cds-NP_014432.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:34956-35921:- | gene-YNR034W_JAY291 | rna-NM_001183211.3_JAY291 | cds-NP_014432.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:689174-690139:+ | gene-YNR034W_MUCL30387 | rna-NM_001183211.3_MUCL30387 | cds-NP_014432.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:729997-730962:+ | gene-YNR034W_MUCL30388 | rna-NM_001183211.3_MUCL30388 | cds-NP_014432.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:671215-672180:+ | gene-YNR034W_MUCL39482 | rna-NM_001183211.3_MUCL39482 | cds-NP_014432.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:675392-676357:+ | gene-YNR034W_MUCL42920 | rna-NM_001183211.3_MUCL42920 | cds-NP_014432.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:690290-691255:+ | gene-YNR034W_NCIM3186 | rna-NM_001183211.3_NCIM3186 | cds-NP_014432.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:673724-674689:+ | gene-YNR034W_NCYC1407 | rna-NM_001183211.3_NCYC1407 | cds-NP_014432.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:674820-675785:+ | gene-YNR034W_PE2H3 | rna-NM_001183211.3_PE2H3 | cds-NP_014432.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:676138-677103:+ | gene-YNR034W_PE2H4 | rna-NM_001183211.3_PE2H4 | cds-NP_014432.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:690321-691286:+ | gene-YNR034W_S288C | rna-NM_001183211.3_S288C | cds-NP_014432.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:35106-36071:- | gene-YNR034W_SA1 | rna-NM_001183211.3_SA1 | cds-NP_014432.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:667194-668159:+ | gene-YNR034W_ThermosaccDry | rna-NM_001183211.3_ThermosaccDry | cds-NP_014432.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:709196-710161:+ | gene-YNR034W_VR1 | rna-NM_001183211.3_VR1 | cds-NP_014432.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:576602-577567:+ | gene-YNR034W_ZTW1 | rna-NM_001183211.3_ZTW1 | cds-NP_014432.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:681286-682251:+ | gene-YNR034W_Sparadoxus | rna-NM_001183211.3_Sparadoxus | cds-NP_014432.3_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |