Gene name: SOG2
Reference locus (S288C): YOR353C
Gene biotype: protein_coding
Description: Leucine-rich repeat-containing protein SOG2; Key component of the RAM signaling network; required for proper cell morphogenesis and cell separation after mitosis
Top 10 interactors (score): HYM1 (0.999); KIC1 (0.998); MOB2 (0.995); CBK1 (0.995); TAO3 (0.994); ACE2 (0.872); SPS1 (0.814); MNS1 (0.788); SWI5 (0.723); CSS1 (0.681); HPF1 (0.681); SWA2 (0.67); DBF2 (0.662); MSL1 (0.653); ATG17 (0.645); DPM1 (0.644); FAR8 (0.637); BMH1 (0.633); VPS35 (0.625); CKB1 (0.601)
Homologues (species, bitscore): LRRC7 (Homo sapiens, 64.7); Lrrc7 (Mus musculus, 65.1); lrrc7 (Danio rerio, 68.2); ENSXETP00000025166 (Xenopus tropicalis, 65.1); CG3040 (Drosophila melanogaster, 60.8); ZK546.2 (Caenorhabditis elegans, 65.1); PIRL2 (Arabidopsis thaliana, 70.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:985035-987410:- | gene-YOR353C_AKU4011 | rna-NM_001183773.3_AKU4011 | cds-NP_014998.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000078.1:22217-24592:- | gene-YOR353C_BG1 | rna-NM_001183773.3_BG1 | cds-NP_014998.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:969853-972228:- | gene-YOR353C_Bruggeman | rna-NM_001183773.3_Bruggeman | cds-NP_014998.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:969679-972054:- | gene-YOR353C_CAT1 | rna-NM_001183773.3_CAT1 | cds-NP_014998.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:969445-971820:- | gene-YOR353C_CBS1585 | rna-NM_001183773.3_CBS1585 | cds-NP_014998.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:964259-966634:- | gene-YOR353C_CBS436 | rna-NM_001183773.3_CBS436 | cds-NP_014998.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:198745-201120:- | gene-YOR353C_CBS6412 | rna-NM_001183773.3_CBS6412 | cds-NP_014998.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:973717-976092:- | gene-YOR353C_CBS6413 | rna-NM_001183773.3_CBS6413 | cds-NP_014998.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:998241-1000616:- | gene-YOR353C_CENPK1137D | rna-NM_001183773.3_CENPK1137D | cds-NP_014998.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:213739-216114:- | gene-YOR353C_EthanolRed | rna-NM_001183773.3_EthanolRed | cds-NP_014998.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:966568-968943:- | gene-YOR353C_FaliES1 | rna-NM_001183773.3_FaliES1 | cds-NP_014998.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:36722-39097:+ | gene-YOR353C_JAY291 | rna-NM_001183773.3_JAY291 | cds-NP_014998.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:979180-981555:- | gene-YOR353C_MUCL30387 | rna-NM_001183773.3_MUCL30387 | cds-NP_014998.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:987198-989573:- | gene-YOR353C_MUCL30388 | rna-NM_001183773.3_MUCL30388 | cds-NP_014998.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:975980-978355:- | gene-YOR353C_MUCL39482 | rna-NM_001183773.3_MUCL39482 | cds-NP_014998.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:983585-985960:- | gene-YOR353C_MUCL42920 | rna-NM_001183773.3_MUCL42920 | cds-NP_014998.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:998342-1000717:- | gene-YOR353C_NCIM3186 | rna-NM_001183773.3_NCIM3186 | cds-NP_014998.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:976989-979364:- | gene-YOR353C_NCYC1407 | rna-NM_001183773.3_NCYC1407 | cds-NP_014998.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:972247-974622:- | gene-YOR353C_PE2H3 | rna-NM_001183773.3_PE2H3 | cds-NP_014998.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:988599-990974:- | gene-YOR353C_PE2H4 | rna-NM_001183773.3_PE2H4 | cds-NP_014998.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:998453-1000828:- | gene-YOR353C_S288C | rna-NM_001183773.3_S288C | cds-NP_014998.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:102902-105277:- | gene-YOR353C_SA1 | rna-NM_001183773.3_SA1 | cds-NP_014998.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:965738-968113:- | gene-YOR353C_ThermosaccDry | rna-NM_001183773.3_ThermosaccDry | cds-NP_014998.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:1026999-1029374:- | gene-YOR353C_VR1 | rna-NM_001183773.3_VR1 | cds-NP_014998.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:698470-700845:- | gene-YOR353C_ZTW1 | rna-NM_001183773.3_ZTW1 | cds-NP_014998.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:971999-974386:- | gene-YOR353C_Sparadoxus | rna-NM_001183773.3_Sparadoxus | cds-NP_014998.3_Sparadoxus | 89.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |