SOE1 (YNCG0012W)

Gene profile

Gene name: SOE1
Reference locus (S288C): YNCG0012W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:331551-331622:+ gene-YNCG0012W_AKU4011 rna-YNCG0012W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:630667-630738:+ gene-YNCG0012W_Bruggeman rna-YNCG0012W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:329628-329699:+ gene-YNCG0012W_CAT1 rna-YNCG0012W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:334876-334947:+ gene-YNCG0012W_CBS1585 rna-YNCG0012W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:319257-319328:+ gene-YNCG0012W_CBS6412 rna-YNCG0012W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:329182-329253:+ gene-YNCG0012W_CBS6413 rna-YNCG0012W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:320636-320707:+ gene-YNCG0012W_EthanolRed rna-YNCG0012W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:323197-323268:+ gene-YNCG0012W_FaliES1 rna-YNCG0012W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:536356-536427:+ gene-YNCG0012W_MUCL30387 rna-YNCG0012W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:538975-539046:+ gene-YNCG0012W_MUCL30388 rna-YNCG0012W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:331404-331475:+ gene-YNCG0012W_MUCL39482 rna-YNCG0012W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:544390-544461:+ gene-YNCG0012W_MUCL42920 rna-YNCG0012W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:328583-328654:+ gene-YNCG0012W_NCIM3186 rna-YNCG0012W_NCIM3186 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:322939-323010:+ gene-YNCG0012W_NCYC1407 rna-YNCG0012W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:324608-324679:+ gene-YNCG0012W_PE2H3 rna-YNCG0012W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:329608-329679:+ gene-YNCG0012W_PE2H4 rna-YNCG0012W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:328583-328654:+ gene-YNCG0012W_S288C rna-YNCG0012W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000089.1:5965-6036:+ gene-YNCG0012W_SA1 rna-YNCG0012W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:323450-323521:+ gene-YNCG0012W_ThermosaccDry rna-YNCG0012W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:433316-433387:+ gene-YNCG0012W_VR1 rna-YNCG0012W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:326519-326590:+ gene-YNCG0012W_Sparadoxus rna-YNCG0012W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files