Gene name: SNZ2
Reference locus (S288C): YNL333W
Gene biotype: protein_coding
Description: Probable pyridoxal 5'-phosphate synthase subunit SNZ2; Member of a stationary phase-induced gene family; transcription of SNZ2 is induced prior to diauxic shift, and also in the absence of thiamin in a Thi2p-dependent manner; forms a coregulated gene pair with SNO2; interacts with Thi11p
Top 10 interactors (score): SNO2 (0.999); SNO3 (0.999); SNO1 (0.999); SNZ3 (0.997); SNZ1 (0.981); THI5 (0.887); RBK1 (0.806); PDX3 (0.803); RKI1 (0.8); BUD16 (0.782); BUD17 (0.782); THI21 (0.759); THI6 (0.747); THI80 (0.746); THI11 (0.726); THI4 (0.701); TKL1 (0.657); YGR017W (0.65); GCD7 (0.648); NQM1 (0.639)
Homologues (species, bitscore): RSR4 (Arabidopsis thaliana, 372.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:7034-7930:+ | gene-YNL333W_AKU4011 | rna-NM_001183171.1_AKU4011 | cds-NP_014066.1_AKU4011 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:427460-428356:- | gene-YNL333W_CAT1 | rna-NM_001183171.1_CAT1 | cds-NP_014066.1_CAT1 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:7885-8781:+ | gene-YNL333W_CBS1585 | rna-NM_001183171.1_CBS1585 | cds-NP_014066.1_CBS1585 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:3923-4819:+ | gene-YNL333W_CBS6412 | rna-NM_001183171.1_CBS6412 | cds-NP_014066.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:4048-4944:+ | gene-YNL333W_CBS6413 | rna-NM_001183171.1_CBS6413 | cds-NP_014066.1_CBS6413 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:3979-4875:+ | gene-YNL333W_EthanolRed | rna-NM_001183171.1_EthanolRed | cds-NP_014066.1_EthanolRed | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:4495-5391:+ | gene-YNL333W_FaliES1 | rna-NM_001183171.1_FaliES1 | cds-NP_014066.1_FaliES1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000170.1:1-399:+ | gene-YNL333W_JAY291 | rna-NM_001183171.1_JAY291 | cds-NP_014066.1_JAY291 | 44.2 | 44.4 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:8257-9153:+ | gene-YNL333W_MUCL30387 | rna-NM_001183171.1_MUCL30387 | cds-NP_014066.1_MUCL30387 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:9690-10586:+ | gene-YNL333W_MUCL30388 | rna-NM_001183171.1_MUCL30388 | cds-NP_014066.1_MUCL30388 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:4670-5566:+ | gene-YNL333W_MUCL39482 | rna-NM_001183171.1_MUCL39482 | cds-NP_014066.1_MUCL39482 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:7726-8622:+ | gene-YNL333W_NCYC1407 | rna-NM_001183171.1_NCYC1407 | cds-NP_014066.1_NCYC1407 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:723230-724126:- | gene-YNL333W_PE2H3 | rna-NM_001183171.1_PE2H3 | cds-NP_014066.1_PE2H3 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:716919-717815:- | gene-YNL333W_PE2H4 | rna-NM_001183171.1_PE2H4 | cds-NP_014066.1_PE2H4 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:13267-14163:+ | gene-YNL333W_S288C | rna-NM_001183171.1_S288C | cds-NP_014066.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000182.1:1540-1697:- | gene-YNL333W_SA1 | rna-NM_001183171.1_SA1 | cds-NP_014066.1_SA1 | 17.0 | 17.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:5485-6381:+ | gene-YNL333W_ThermosaccDry | rna-NM_001183171.1_ThermosaccDry | cds-NP_014066.1_ThermosaccDry | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:725548-726444:- | gene-YNL333W_Sparadoxus | rna-NM_001183171.1_Sparadoxus | cds-NP_014066.1_Sparadoxus | 89.7 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |