Gene name: SNZ1
Reference locus (S288C): YMR096W
Gene biotype: protein_coding
Description: Pyridoxal 5'-phosphate synthase subunit SNZ1; Protein involved in vitamin B6 biosynthesis; member of a stationary phase-induced gene family; coregulated with SNO1; interacts with Sno1p and with Yhr198p, perhaps as a multiprotein complex containing other Snz and Sno proteins; Belongs to the PdxS/SNZ family
Top 10 interactors (score): SNO1 (0.999); SNO3 (0.997); SNO2 (0.996); SNZ2 (0.981); SNZ3 (0.964); SNF12 (0.917); RSC6 (0.916); PRO1 (0.9); BUD16 (0.897); PDX3 (0.809); RBK1 (0.806); RKI1 (0.8); HIS3 (0.796); TPN1 (0.796); BUD17 (0.782); THI11 (0.701); THI5 (0.695); YGR017W (0.65); FYV7 (0.643); TAL1 (0.639)
Homologues (species, bitscore): RSR4 (Arabidopsis thaliana, 368.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:496345-497238:+ | gene-YMR096W_AKU4011 | rna-NM_001182596.1_AKU4011 | cds-NP_013814.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:45771-46664:- | gene-YMR096W_BG1 | rna-NM_001182596.1_BG1 | cds-NP_013814.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:438773-439666:+ | gene-YMR096W_Bruggeman | rna-NM_001182596.1_Bruggeman | cds-NP_013814.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:439096-439989:+ | gene-YMR096W_CAT1 | rna-NM_001182596.1_CAT1 | cds-NP_013814.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:429288-430181:+ | gene-YMR096W_CBS1585 | rna-NM_001182596.1_CBS1585 | cds-NP_013814.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:434613-435506:+ | gene-YMR096W_CBS436 | rna-NM_001182596.1_CBS436 | cds-NP_013814.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:542384-543277:+ | gene-YMR096W_CBS6412 | rna-NM_001182596.1_CBS6412 | cds-NP_013814.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:428545-429438:+ | gene-YMR096W_CBS6413 | rna-NM_001182596.1_CBS6413 | cds-NP_013814.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:452516-453409:+ | gene-YMR096W_CENPK1137D | rna-NM_001182596.1_CENPK1137D | cds-NP_013814.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:429179-430072:+ | gene-YMR096W_EthanolRed | rna-NM_001182596.1_EthanolRed | cds-NP_013814.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:432345-433238:+ | gene-YMR096W_FaliES1 | rna-NM_001182596.1_FaliES1 | cds-NP_013814.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:3975-4868:- | gene-YMR096W_JAY291 | rna-NM_001182596.1_JAY291 | cds-NP_013814.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:435704-436597:+ | gene-YMR096W_MUCL30387 | rna-NM_001182596.1_MUCL30387 | cds-NP_013814.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:439691-440584:+ | gene-YMR096W_MUCL30388 | rna-NM_001182596.1_MUCL30388 | cds-NP_013814.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:429597-430490:+ | gene-YMR096W_MUCL39482 | rna-NM_001182596.1_MUCL39482 | cds-NP_013814.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:436262-437155:+ | gene-YMR096W_MUCL42920 | rna-NM_001182596.1_MUCL42920 | cds-NP_013814.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:458362-459255:+ | gene-YMR096W_NCIM3186 | rna-NM_001182596.1_NCIM3186 | cds-NP_013814.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:429490-430383:+ | gene-YMR096W_NCYC1407 | rna-NM_001182596.1_NCYC1407 | cds-NP_013814.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:435211-436104:+ | gene-YMR096W_PE2H3 | rna-NM_001182596.1_PE2H3 | cds-NP_013814.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:441306-442199:+ | gene-YMR096W_PE2H4 | rna-NM_001182596.1_PE2H4 | cds-NP_013814.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:458408-459301:+ | gene-YMR096W_S288C | rna-NM_001182596.1_S288C | cds-NP_013814.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:90865-91758:- | gene-YMR096W_SA1 | rna-NM_001182596.1_SA1 | cds-NP_013814.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:430148-431041:+ | gene-YMR096W_ThermosaccDry | rna-NM_001182596.1_ThermosaccDry | cds-NP_013814.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:441797-442690:+ | gene-YMR096W_VR1 | rna-NM_001182596.1_VR1 | cds-NP_013814.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:406419-407312:+ | gene-YMR096W_ZTW1 | rna-NM_001182596.1_ZTW1 | cds-NP_013814.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:442887-443780:+ | gene-YMR096W_Sparadoxus | rna-NM_001182596.1_Sparadoxus | cds-NP_013814.1_Sparadoxus | 90.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |