SNR87 (YNCK0015C)

Gene profile

Gene name: SNR87
Reference locus (S288C): YNCK0015C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:417046-417154:- gene-YNCK0015C_AKU4011 rna-NR_132202.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:226748-226856:+ gene-YNCK0015C_BG1 rna-NR_132202.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:438752-438860:- gene-YNCK0015C_Bruggeman rna-NR_132202.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:433859-433967:- gene-YNCK0015C_CAT1 rna-NR_132202.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:429765-429873:- gene-YNCK0015C_CBS1585 rna-NR_132202.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005353.1:428628-428736:- gene-YNCK0015C_CBS436 rna-NR_132202.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:413922-414030:- gene-YNCK0015C_CBS6412 rna-NR_132202.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:429620-429728:- gene-YNCK0015C_CBS6413 rna-NR_132202.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:430707-430815:- gene-YNCK0015C_CENPK1137D rna-NR_132202.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:427527-427635:- gene-YNCK0015C_EthanolRed rna-NR_132202.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:429617-429725:- gene-YNCK0015C_FaliES1 rna-NR_132202.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000142.1:1310-1418:+ gene-YNCK0015C_JAY291 rna-NR_132202.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000145.1:769-877:+ gene-YNCK0015C_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:438070-438178:- gene-YNCK0015C_MUCL30387 rna-NR_132202.1_MUCL30387 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:433677-433785:- gene-YNCK0015C_MUCL30388 rna-NR_132202.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:429082-429190:- gene-YNCK0015C_MUCL39482 rna-NR_132202.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:434914-435022:- gene-YNCK0015C_MUCL42920 rna-NR_132202.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:431019-431127:- gene-YNCK0015C_NCIM3186 rna-NR_132202.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:429275-429383:- gene-YNCK0015C_NCYC1407 rna-NR_132202.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:453967-454075:- gene-YNCK0015C_PE2H3 rna-NR_132202.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:438708-438816:- gene-YNCK0015C_PE2H4 rna-NR_132202.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:431030-431138:- gene-YNCK0015C_S288C rna-NR_132202.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000027.1:109310-109418:- gene-YNCK0015C_SA1 rna-NR_132202.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:429716-429824:- gene-YNCK0015C_ThermosaccDry rna-NR_132202.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:428989-429097:- gene-YNCK0015C_VR1 rna-NR_132202.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:427761-427869:- gene-YNCK0015C_ZTW1 rna-NR_132202.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:452727-452835:- gene-YNCK0015C_Sparadoxus rna-NR_132202.1_Sparadoxus Unknown 95.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files