SNR84 (YNCD0032C)

Gene profile

Gene name: SNR84
Reference locus (S288C): YNCD0032C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1432515-1433060:- gene-YNCD0032C_AKU4011 rna-NR_132162.1_AKU4011 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000073.1:74140-74688:- gene-YNCD0032C_BG1 rna-NR_132162.1_BG1 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1463809-1464359:- gene-YNCD0032C_Bruggeman rna-NR_132162.1_Bruggeman Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1440980-1441528:- gene-YNCD0032C_CAT1 rna-NR_132162.1_CAT1 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1427243-1427788:- gene-YNCD0032C_CBS1585 rna-NR_132162.1_CBS1585 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1446448-1446995:- gene-YNCD0032C_CBS436 rna-NR_132162.1_CBS436 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1422406-1422951:- gene-YNCD0032C_CBS6412 rna-NR_132162.1_CBS6412 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1445903-1446448:- gene-YNCD0032C_CBS6413 rna-NR_132162.1_CBS6413 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1491157-1491703:- gene-YNCD0032C_CENPK1137D rna-NR_132162.1_CENPK1137D Unknown 98.9 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1435774-1436319:- gene-YNCD0032C_EthanolRed rna-NR_132162.1_EthanolRed Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1439326-1439871:- gene-YNCD0032C_FaliES1 rna-NR_132162.1_FaliES1 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000026.1:137672-138220:- gene-YNCD0032C_JAY291 rna-NR_132162.1_JAY291 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1446902-1447448:- gene-YNCD0032C_MUCL30387 rna-NR_132162.1_MUCL30387 Unknown 98.7 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1428345-1428895:- gene-YNCD0032C_MUCL30388 rna-NR_132162.1_MUCL30388 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1418740-1419285:- gene-YNCD0032C_MUCL39482 rna-NR_132162.1_MUCL39482 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:1361376-1361922:- gene-YNCD0032C_MUCL42920 rna-NR_132162.1_MUCL42920 Unknown 98.1 99.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1492400-1492949:- gene-YNCD0032C_NCIM3186 rna-NR_132162.1_NCIM3186 Unknown 98.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1432033-1432578:- gene-YNCD0032C_NCYC1407 rna-NR_132162.1_NCYC1407 Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1442939-1443487:- gene-YNCD0032C_PE2H3 rna-NR_132162.1_PE2H3 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1448407-1448955:- gene-YNCD0032C_PE2H4 rna-NR_132162.1_PE2H4 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1492477-1493026:- gene-YNCD0032C_S288C rna-NR_132162.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:124081-124629:+ gene-YNCD0032C_SA1 rna-NR_132162.1_SA1 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1443548-1444093:- gene-YNCD0032C_ThermosaccDry rna-NR_132162.1_ThermosaccDry Unknown 99.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1459330-1459878:- gene-YNCD0032C_VR1 rna-NR_132162.1_VR1 Unknown 98.0 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:486210-486757:- gene-YNCD0032C_ZTW1 rna-NR_132162.1_ZTW1 Unknown 97.8 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1452459-1453033:- gene-YNCD0032C_Sparadoxus rna-NR_132162.1_Sparadoxus Unknown 81.8 97.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files