SNR83 (YNCM0030W)

Gene profile

Gene name: SNR83
Reference locus (S288C): YNCM0030W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:666280-666585:+ gene-YNCM0030W_AKU4011 rna-NR_132245.1_AKU4011 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:6457-6762:- gene-YNCM0030W_BG1 rna-NR_132245.1_BG1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:610497-610802:+ gene-YNCM0030W_Bruggeman rna-NR_132245.1_Bruggeman Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:613243-613548:+ gene-YNCM0030W_CAT1 rna-NR_132245.1_CAT1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:598536-598841:+ gene-YNCM0030W_CBS1585 rna-NR_132245.1_CBS1585 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005355.1:602802-603107:+ gene-YNCM0030W_CBS436 rna-NR_132245.1_CBS436 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:710095-710400:+ gene-YNCM0030W_CBS6412 rna-NR_132245.1_CBS6412 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:597685-597990:+ gene-YNCM0030W_CBS6413 rna-NR_132245.1_CBS6413 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:620928-621233:+ gene-YNCM0030W_CENPK1137D rna-NR_132245.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:658725-659030:+ gene-YNCM0030W_EthanolRed rna-NR_132245.1_EthanolRed Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:604381-604686:+ gene-YNCM0030W_FaliES1 rna-NR_132245.1_FaliES1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000265.1:6374-6679:- gene-YNCM0030W_JAY291 rna-NR_132245.1_JAY291 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:604043-604348:+ gene-YNCM0030W_MUCL30387 rna-NR_132245.1_MUCL30387 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:610823-611128:+ gene-YNCM0030W_MUCL30388 rna-NR_132245.1_MUCL30388 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:599608-599913:+ gene-YNCM0030W_MUCL39482 rna-NR_132245.1_MUCL39482 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:606942-607247:+ gene-YNCM0030W_MUCL42920 rna-NR_132245.1_MUCL42920 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:626303-626608:+ gene-YNCM0030W_NCIM3186 rna-NR_132245.1_NCIM3186 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:599260-599565:+ gene-YNCM0030W_NCYC1407 rna-NR_132245.1_NCYC1407 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:609129-609434:+ gene-YNCM0030W_PE2H3 rna-NR_132245.1_PE2H3 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:610115-610420:+ gene-YNCM0030W_PE2H4 rna-NR_132245.1_PE2H4 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:626349-626654:+ gene-YNCM0030W_S288C rna-NR_132245.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:181461-181766:- gene-YNCM0030W_SA1 rna-NR_132245.1_SA1 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:600507-600812:+ gene-YNCM0030W_ThermosaccDry rna-NR_132245.1_ThermosaccDry Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:613679-613984:+ gene-YNCM0030W_VR1 rna-NR_132245.1_VR1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:16297-16602:+ gene-YNCM0030W_ZTW1 rna-NR_132245.1_ZTW1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:618433-618734:+ gene-YNCM0030W_Sparadoxus rna-NR_132245.1_Sparadoxus Unknown 91.8 98.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files