SNR7-S (YNCG0045C)

Gene profile

Gene name: SNR7-S
Reference locus (S288C): YNCG0045C
Gene biotype: snRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:904798-904976:- gene-YNCG0045C_AKU4011 rna-NR_132185.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000021.1:185020-185198:- gene-YNCG0045C_BG1 rna-NR_132185.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:912502-912680:- gene-YNCG0045C_Bruggeman rna-NR_132185.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:910751-910929:- gene-YNCG0045C_CAT1 rna-NR_132185.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:907748-907926:- gene-YNCG0045C_CBS1585 rna-NR_132185.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:911428-911606:- gene-YNCG0045C_CBS436 rna-NR_132185.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:898618-898796:- gene-YNCG0045C_CBS6412 rna-NR_132185.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:904677-904855:- gene-YNCG0045C_CBS6413 rna-NR_132185.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:939076-939254:- gene-YNCG0045C_CENPK1137D rna-NR_132185.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:893128-893306:- gene-YNCG0045C_EthanolRed rna-NR_132185.1_EthanolRed Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:897519-897697:- gene-YNCG0045C_FaliES1 rna-NR_132185.1_FaliES1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000076.1:132568-132746:+ gene-YNCG0045C_JAY291 rna-NR_132185.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:910417-910595:- gene-YNCG0045C_MUCL30387 rna-NR_132185.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:909673-909851:- gene-YNCG0045C_MUCL30388 rna-NR_132185.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:902825-903003:- gene-YNCG0045C_MUCL39482 rna-NR_132185.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:921377-921555:- gene-YNCG0045C_MUCL42920 rna-NR_132185.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:939494-939672:- gene-YNCG0045C_NCIM3186 rna-NR_132185.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:898477-898655:- gene-YNCG0045C_NCYC1407 rna-NR_132185.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:923415-923593:- gene-YNCG0045C_PE2H3 rna-NR_132185.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:928525-928703:- gene-YNCG0045C_PE2H4 rna-NR_132185.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:939494-939672:- gene-YNCG0045C_S288C rna-NR_132185.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000045.1:62092-62270:+ gene-YNCG0045C_SA1 rna-NR_132185.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:918030-918208:- gene-YNCG0045C_ThermosaccDry rna-NR_132185.1_ThermosaccDry Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:1022843-1023021:- gene-YNCG0045C_VR1 rna-NR_132185.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:219465-219643:- gene-YNCG0045C_ZTW1 rna-NR_132185.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:910152-910331:- gene-YNCG0045C_Sparadoxus rna-NR_132185.1_Sparadoxus Unknown 94.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files