SNR53 (YNCE0003W)

Gene profile

Gene name: SNR53
Reference locus (S288C): YNCE0003W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:56106-56196:+ gene-YNCE0003W_AKU4011 rna-NR_132165.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000075.1:24338-24431:- gene-YNCE0003W_BG1 rna-NR_132165.1_BG1 Unknown 94.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:59622-59712:+ gene-YNCE0003W_Bruggeman rna-NR_132165.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:58043-58133:+ gene-YNCE0003W_CAT1 rna-NR_132165.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:56051-56141:+ gene-YNCE0003W_CBS1585 rna-NR_132165.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005347.1:57109-57199:+ gene-YNCE0003W_CBS436 rna-NR_132165.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:56303-56393:+ gene-YNCE0003W_CBS6412 rna-NR_132165.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:60947-61037:+ gene-YNCE0003W_CBS6413 rna-NR_132165.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:59537-59627:+ gene-YNCE0003W_CENPK1137D rna-NR_132165.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:55858-55948:+ gene-YNCE0003W_EthanolRed rna-NR_132165.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:56121-56211:+ gene-YNCE0003W_FaliES1 rna-NR_132165.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000427.1:1836-1926:- gene-YNCE0003W_JAY291 rna-NR_132165.1_JAY291 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:60056-60146:+ gene-YNCE0003W_MUCL30387 rna-NR_132165.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:56167-56257:+ gene-YNCE0003W_MUCL30388 rna-NR_132165.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:55418-55508:+ gene-YNCE0003W_MUCL39482 rna-NR_132165.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:60052-60142:+ gene-YNCE0003W_MUCL42920 rna-NR_132165.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:61698-61788:+ gene-YNCE0003W_NCIM3186 rna-NR_132165.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:60514-60604:+ gene-YNCE0003W_NCYC1407 rna-NR_132165.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:64533-64623:+ gene-YNCE0003W_PE2H3 rna-NR_132165.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:60445-60535:+ gene-YNCE0003W_PE2H4 rna-NR_132165.1_PE2H4 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:61699-61789:+ gene-YNCE0003W_S288C rna-NR_132165.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000053.1:25194-25284:- gene-YNCE0003W_SA1 rna-NR_132165.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:56521-56611:+ gene-YNCE0003W_ThermosaccDry rna-NR_132165.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:55736-55826:+ gene-YNCE0003W_VR1 rna-NR_132165.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:55456-55546:+ gene-YNCE0003W_ZTW1 rna-NR_132165.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:59714-59804:+ gene-YNCE0003W_Sparadoxus rna-NR_132165.1_Sparadoxus Unknown 97.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files