SNR48 (YNCG0026W)

Gene profile

Gene name: SNR48
Reference locus (S288C): YNCG0026W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:593285-593397:+ gene-YNCG0026W_AKU4011 rna-NR_132183.1_AKU4011 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000173.1:29678-29791:+ gene-YNCG0026W_BG1 rna-NR_132183.1_BG1 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:595565-595677:+ gene-YNCG0026W_Bruggeman rna-NR_132183.1_Bruggeman Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:593989-594102:+ gene-YNCG0026W_CAT1 rna-NR_132183.1_CAT1 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:594599-594711:+ gene-YNCG0026W_CBS1585 rna-NR_132183.1_CBS1585 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:595886-595998:+ gene-YNCG0026W_CBS436 rna-NR_132183.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:587394-587506:+ gene-YNCG0026W_CBS6412 rna-NR_132183.1_CBS6412 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:591396-591508:+ gene-YNCG0026W_CBS6413 rna-NR_132183.1_CBS6413 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:609321-609433:+ gene-YNCG0026W_CENPK1137D rna-NR_132183.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:581524-581636:+ gene-YNCG0026W_EthanolRed rna-NR_132183.1_EthanolRed Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:585008-585120:+ gene-YNCG0026W_FaliES1 rna-NR_132183.1_FaliES1 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:35948-36060:+ gene-YNCG0026W_JAY291 rna-NR_132183.1_JAY291 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:592197-592309:+ gene-YNCG0026W_MUCL30387 rna-NR_132183.1_MUCL30387 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:595594-595706:+ gene-YNCG0026W_MUCL30388 rna-NR_132183.1_MUCL30388 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:590416-590528:+ gene-YNCG0026W_MUCL39482 rna-NR_132183.1_MUCL39482 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:600222-600334:+ gene-YNCG0026W_MUCL42920 rna-NR_132183.1_MUCL42920 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:609584-609696:+ gene-YNCG0026W_NCIM3186 rna-NR_132183.1_NCIM3186 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:584614-584726:+ gene-YNCG0026W_NCYC1407 rna-NR_132183.1_NCYC1407 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:587850-587962:+ gene-YNCG0026W_PE2H3 rna-NR_132183.1_PE2H3 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:592957-593069:+ gene-YNCG0026W_PE2H4 rna-NR_132183.1_PE2H4 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:609584-609696:+ gene-YNCG0026W_S288C rna-NR_132183.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:36048-36161:+ gene-YNCG0026W_SA1 rna-NR_132183.1_SA1 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:604345-604457:+ gene-YNCG0026W_ThermosaccDry rna-NR_132183.1_ThermosaccDry Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:701270-701383:+ gene-YNCG0026W_VR1 rna-NR_132183.1_VR1 Unknown 98.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:59816-59928:+ gene-YNCG0026W_ZTW1 rna-NR_132183.1_ZTW1 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:594822-594935:+ gene-YNCG0026W_Sparadoxus rna-NR_132183.1_Sparadoxus Unknown 94.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files