SNR46 (YNCG0024W)

Gene profile

Gene name: SNR46
Reference locus (S288C): YNCG0024W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:540978-541174:+ gene-YNCG0024W_AKU4011 rna-NR_132182.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:34660-34856:- gene-YNCG0024W_BG1 rna-NR_132182.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:543246-543442:+ gene-YNCG0024W_Bruggeman rna-NR_132182.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:541313-541509:+ gene-YNCG0024W_CAT1 rna-NR_132182.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:542309-542505:+ gene-YNCG0024W_CBS1585 rna-NR_132182.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:537085-537281:+ gene-YNCG0024W_CBS436 rna-NR_132182.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:535067-535263:+ gene-YNCG0024W_CBS6412 rna-NR_132182.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:539153-539349:+ gene-YNCG0024W_CBS6413 rna-NR_132182.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:545211-545407:+ gene-YNCG0024W_CENPK1137D rna-NR_132182.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:529193-529389:+ gene-YNCG0024W_EthanolRed rna-NR_132182.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:532680-532876:+ gene-YNCG0024W_FaliES1 rna-NR_132182.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:71372-71568:+ gene-YNCG0024W_JAY291 rna-NR_132182.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:539880-540076:+ gene-YNCG0024W_MUCL30387 rna-NR_132182.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:542499-542695:+ gene-YNCG0024W_MUCL30388 rna-NR_132182.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:538131-538327:+ gene-YNCG0024W_MUCL39482 rna-NR_132182.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:547914-548110:+ gene-YNCG0024W_MUCL42920 rna-NR_132182.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:545370-545566:+ gene-YNCG0024W_NCIM3186 rna-NR_132182.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:532314-532510:+ gene-YNCG0024W_NCYC1407 rna-NR_132182.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:535194-535390:+ gene-YNCG0024W_PE2H3 rna-NR_132182.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:540301-540497:+ gene-YNCG0024W_PE2H4 rna-NR_132182.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:545370-545566:+ gene-YNCG0024W_S288C rna-NR_132182.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:16350-16546:- gene-YNCG0024W_SA1 rna-NR_132182.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:552017-552213:+ gene-YNCG0024W_ThermosaccDry rna-NR_132182.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:642464-642660:+ gene-YNCG0024W_VR1 rna-NR_132182.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:7500-7696:+ gene-YNCG0024W_ZTW1 rna-NR_132182.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:541579-541778:+ gene-YNCG0024W_Sparadoxus rna-NR_132182.1_Sparadoxus Unknown 91.1 98.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files