SNR45 (YNCP0021W)

Gene profile

Gene name: SNR45
Reference locus (S288C): YNCP0021W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:787879-788050:+ gene-YNCP0021W_AKU4011 rna-NR_132271.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:109314-109485:- gene-YNCP0021W_BG1 rna-NR_132271.1_BG1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:868178-868349:+ gene-YNCP0021W_Bruggeman rna-NR_132271.1_Bruggeman Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:910448-910619:+ gene-YNCP0021W_CAT1 rna-NR_132271.1_CAT1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:792135-792306:+ gene-YNCP0021W_CBS1585 rna-NR_132271.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005358.1:806227-806398:+ gene-YNCP0021W_CBS436 rna-NR_132271.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:794864-795035:+ gene-YNCP0021W_CBS6412 rna-NR_132271.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:789586-789757:+ gene-YNCP0021W_CBS6413 rna-NR_132271.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:821730-821901:+ gene-YNCP0021W_CENPK1137D rna-NR_132271.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:1110045-1110216:+ gene-YNCP0021W_EthanolRed rna-NR_132271.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:789592-789763:+ gene-YNCP0021W_FaliES1 rna-NR_132271.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000437.1:2321-2492:+ gene-YNCP0021W_JAY291 rna-NR_132271.1_JAY291 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:808369-808540:+ gene-YNCP0021W_MUCL30387 rna-NR_132271.1_MUCL30387 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:808334-808505:+ gene-YNCP0021W_MUCL30388 rna-NR_132271.1_MUCL30388 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:784648-784819:+ gene-YNCP0021W_MUCL39482 rna-NR_132271.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:848089-848260:+ gene-YNCP0021W_MUCL42920 rna-NR_132271.1_MUCL42920 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:821715-821886:+ gene-YNCP0021W_NCIM3186 rna-NR_132271.1_NCIM3186 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:793236-793407:+ gene-YNCP0021W_NCYC1407 rna-NR_132271.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:799959-800130:+ gene-YNCP0021W_PE2H3 rna-NR_132271.1_PE2H3 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:799607-799778:+ gene-YNCP0021W_PE2H4 rna-NR_132271.1_PE2H4 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:821732-821903:+ gene-YNCP0021W_S288C rna-NR_132271.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000028.1:113984-114155:+ gene-YNCP0021W_SA1 rna-NR_132271.1_SA1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:789034-789205:+ gene-YNCP0021W_ThermosaccDry rna-NR_132271.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:811459-811630:+ gene-YNCP0021W_VR1 rna-NR_132271.1_VR1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:792405-792576:+ gene-YNCP0021W_ZTW1 rna-NR_132271.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:794514-794685:+ gene-YNCP0021W_Sparadoxus rna-NR_132271.1_Sparadoxus Unknown 98.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files