SNR4 (YNCE0019W)

Gene profile

Gene name: SNR4
Reference locus (S288C): YNCE0019W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:418533-418718:+ gene-YNCE0019W_AKU4011 rna-NR_132169.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:6940-7125:- gene-YNCE0019W_BG1 rna-NR_132169.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:428998-429183:+ gene-YNCE0019W_Bruggeman rna-NR_132169.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:424237-424422:+ gene-YNCE0019W_CAT1 rna-NR_132169.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:417928-418113:+ gene-YNCE0019W_CBS1585 rna-NR_132169.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005347.1:420671-420856:+ gene-YNCE0019W_CBS436 rna-NR_132169.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:417006-417191:+ gene-YNCE0019W_CBS6412 rna-NR_132169.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:423849-424034:+ gene-YNCE0019W_CBS6413 rna-NR_132169.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:422417-422602:+ gene-YNCE0019W_CENPK1137D rna-NR_132169.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:418376-418561:+ gene-YNCE0019W_EthanolRed rna-NR_132169.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:418857-419042:+ gene-YNCE0019W_FaliES1 rna-NR_132169.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000028.1:27118-27303:+ gene-YNCE0019W_JAY291 rna-NR_132169.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:425946-426131:+ gene-YNCE0019W_MUCL30387 rna-NR_132169.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:420893-421078:+ gene-YNCE0019W_MUCL30388 rna-NR_132169.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:416953-417138:+ gene-YNCE0019W_MUCL39482 rna-NR_132169.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:425439-425624:+ gene-YNCE0019W_MUCL42920 rna-NR_132169.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:424697-424882:+ gene-YNCE0019W_NCIM3186 rna-NR_132169.1_NCIM3186 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:422486-422671:+ gene-YNCE0019W_NCYC1407 rna-NR_132169.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:433069-433254:+ gene-YNCE0019W_PE2H3 rna-NR_132169.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:423010-423195:+ gene-YNCE0019W_PE2H4 rna-NR_132169.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:424698-424883:+ gene-YNCE0019W_S288C rna-NR_132169.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000023.1:134253-134438:+ gene-YNCE0019W_SA1 rna-NR_132169.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:419655-419840:+ gene-YNCE0019W_ThermosaccDry rna-NR_132169.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:420703-420888:+ gene-YNCE0019W_VR1 rna-NR_132169.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:416783-416968:+ gene-YNCE0019W_ZTW1 rna-NR_132169.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:420680-420866:+ gene-YNCE0019W_Sparadoxus rna-NR_132169.1_Sparadoxus Unknown 97.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files