SNR38 (YNCK0009W)

Gene profile

Gene name: SNR38
Reference locus (S288C): YNCK0009W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:269746-269840:+ gene-YNCK0009W_AKU4011 rna-NR_132200.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:246921-247015:+ gene-YNCK0009W_BG1 rna-NR_132200.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:287912-288006:+ gene-YNCK0009W_Bruggeman rna-NR_132200.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:282715-282809:+ gene-YNCK0009W_CAT1 rna-NR_132200.1_CAT1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:281987-282081:+ gene-YNCK0009W_CBS1585 rna-NR_132200.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005353.1:280579-280673:+ gene-YNCK0009W_CBS436 rna-NR_132200.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:266613-266707:+ gene-YNCK0009W_CBS6412 rna-NR_132200.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:282441-282535:+ gene-YNCK0009W_CBS6413 rna-NR_132200.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:282827-282921:+ gene-YNCK0009W_CENPK1137D rna-NR_132200.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:280437-280531:+ gene-YNCK0009W_EthanolRed rna-NR_132200.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:281249-281343:+ gene-YNCK0009W_FaliES1 rna-NR_132200.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000357.1:103575-103669:+ gene-YNCK0009W_JAY291 rna-NR_132200.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:289711-289805:+ gene-YNCK0009W_MUCL30387 rna-NR_132200.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:284107-284201:+ gene-YNCK0009W_MUCL30388 rna-NR_132200.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:281772-281866:+ gene-YNCK0009W_MUCL39482 rna-NR_132200.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:286403-286497:+ gene-YNCK0009W_MUCL42920 rna-NR_132200.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:283174-283268:+ gene-YNCK0009W_NCIM3186 rna-NR_132200.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:281966-282060:+ gene-YNCK0009W_NCYC1407 rna-NR_132200.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:289055-289149:+ gene-YNCK0009W_PE2H3 rna-NR_132200.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:285342-285436:+ gene-YNCK0009W_PE2H4 rna-NR_132200.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:283185-283279:+ gene-YNCK0009W_S288C rna-NR_132200.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:199315-199409:+ gene-YNCK0009W_SA1 rna-NR_132200.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:281958-282052:+ gene-YNCK0009W_ThermosaccDry rna-NR_132200.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:281315-281409:+ gene-YNCK0009W_VR1 rna-NR_132200.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:280519-280613:+ gene-YNCK0009W_ZTW1 rna-NR_132200.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:297584-297678:+ gene-YNCK0009W_Sparadoxus rna-NR_132200.1_Sparadoxus Unknown 97.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files