SNR36 (YNCO0022C)

Gene profile

Gene name: SNR36
Reference locus (S288C): YNCO0022C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:678013-678194:- gene-YNCO0022C_AKU4011 rna-NR_132260.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:80070-80250:- gene-YNCO0022C_BG1 rna-NR_132260.1_BG1 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:662026-662206:- gene-YNCO0022C_Bruggeman rna-NR_132260.1_Bruggeman Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:663200-663381:- gene-YNCO0022C_CAT1 rna-NR_132260.1_CAT1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:661002-661183:- gene-YNCO0022C_CBS1585 rna-NR_132260.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005357.1:659121-659301:- gene-YNCO0022C_CBS436 rna-NR_132260.1_CBS436 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:658118-658299:- gene-YNCO0022C_CBS6412 rna-NR_132260.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:666759-666940:- gene-YNCO0022C_CBS6413 rna-NR_132260.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:680435-680616:- gene-YNCO0022C_CENPK1137D rna-NR_132260.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:653990-654171:- gene-YNCO0022C_EthanolRed rna-NR_132260.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:659063-659244:- gene-YNCO0022C_FaliES1 rna-NR_132260.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000038.1:18297-18477:+ gene-YNCO0022C_JAY291 rna-NR_132260.1_JAY291 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:666831-667012:- gene-YNCO0022C_MUCL30387 rna-NR_132260.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:674247-674428:- gene-YNCO0022C_MUCL30388 rna-NR_132260.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:668332-668513:- gene-YNCO0022C_MUCL39482 rna-NR_132260.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:677718-677898:- gene-YNCO0022C_MUCL42920 rna-NR_132260.1_MUCL42920 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:680574-680755:- gene-YNCO0022C_NCIM3186 rna-NR_132260.1_NCIM3186 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:668429-668610:- gene-YNCO0022C_NCYC1407 rna-NR_132260.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:667254-667434:- gene-YNCO0022C_PE2H3 rna-NR_132260.1_PE2H3 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:677631-677811:- gene-YNCO0022C_PE2H4 rna-NR_132260.1_PE2H4 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:680685-680866:- gene-YNCO0022C_S288C rna-NR_132260.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:97250-97430:- gene-YNCO0022C_SA1 rna-NR_132260.1_SA1 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:658247-658428:- gene-YNCO0022C_ThermosaccDry rna-NR_132260.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:722283-722463:- gene-YNCO0022C_VR1 rna-NR_132260.1_VR1 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:391652-391832:- gene-YNCO0022C_ZTW1 rna-NR_132260.1_ZTW1 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:663867-664047:- gene-YNCO0022C_Sparadoxus rna-NR_132260.1_Sparadoxus Unknown 91.2 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files