SNR35 (YNCO0024C)

Gene profile

Gene name: SNR35
Reference locus (S288C): YNCO0024C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:750111-750314:- gene-YNCO0024C_AKU4011 rna-NR_132261.1_AKU4011 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:152143-152346:- gene-YNCO0024C_BG1 rna-NR_132261.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:735570-735773:- gene-YNCO0024C_Bruggeman rna-NR_132261.1_Bruggeman Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:736220-736423:- gene-YNCO0024C_CAT1 rna-NR_132261.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:733098-733301:- gene-YNCO0024C_CBS1585 rna-NR_132261.1_CBS1585 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005357.1:731785-731988:- gene-YNCO0024C_CBS436 rna-NR_132261.1_CBS436 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:730217-730420:- gene-YNCO0024C_CBS6412 rna-NR_132261.1_CBS6412 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:738856-739059:- gene-YNCO0024C_CBS6413 rna-NR_132261.1_CBS6413 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:759092-759295:- gene-YNCO0024C_CENPK1137D rna-NR_132261.1_CENPK1137D Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:726248-726451:- gene-YNCO0024C_EthanolRed rna-NR_132261.1_EthanolRed Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:731645-731848:- gene-YNCO0024C_FaliES1 rna-NR_132261.1_FaliES1 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:94915-95118:+ gene-YNCO0024C_JAY291 rna-NR_132261.1_JAY291 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:738908-739111:- gene-YNCO0024C_MUCL30387 rna-NR_132261.1_MUCL30387 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:746326-746529:- gene-YNCO0024C_MUCL30388 rna-NR_132261.1_MUCL30388 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:740427-740630:- gene-YNCO0024C_MUCL39482 rna-NR_132261.1_MUCL39482 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:750008-750211:- gene-YNCO0024C_MUCL42920 rna-NR_132261.1_MUCL42920 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:759215-759418:- gene-YNCO0024C_NCIM3186 rna-NR_132261.1_NCIM3186 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:740529-740732:- gene-YNCO0024C_NCYC1407 rna-NR_132261.1_NCYC1407 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:739918-740121:- gene-YNCO0024C_PE2H3 rna-NR_132261.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:750295-750498:- gene-YNCO0024C_PE2H4 rna-NR_132261.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:759326-759529:- gene-YNCO0024C_S288C rna-NR_132261.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:169325-169528:- gene-YNCO0024C_SA1 rna-NR_132261.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:730830-731033:- gene-YNCO0024C_ThermosaccDry rna-NR_132261.1_ThermosaccDry Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:794359-794562:- gene-YNCO0024C_VR1 rna-NR_132261.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:463731-463934:- gene-YNCO0024C_ZTW1 rna-NR_132261.1_ZTW1 Unknown 99.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:736697-736902:- gene-YNCO0024C_Sparadoxus rna-NR_132261.1_Sparadoxus Unknown 91.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files