SNR30 (YNCL0003W)

Gene profile

Gene name: SNR30
Reference locus (S288C): YNCL0003W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:186716-187321:+ gene-YNCL0003W_AKU4011 rna-NR_132204.1_AKU4011 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:149990-150595:+ gene-YNCL0003W_BG1 rna-NR_132204.1_BG1 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:197108-197713:+ gene-YNCL0003W_Bruggeman rna-NR_132204.1_Bruggeman Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:197434-198039:+ gene-YNCL0003W_CAT1 rna-NR_132204.1_CAT1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:194342-194947:+ gene-YNCL0003W_CBS1585 rna-NR_132204.1_CBS1585 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:184974-185579:+ gene-YNCL0003W_CBS436 rna-NR_132204.1_CBS436 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:192752-193357:+ gene-YNCL0003W_CBS6412 rna-NR_132204.1_CBS6412 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:194604-195209:+ gene-YNCL0003W_CBS6413 rna-NR_132204.1_CBS6413 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:184025-184630:+ gene-YNCL0003W_CENPK1137D rna-NR_132204.1_CENPK1137D Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:186727-187332:+ gene-YNCL0003W_EthanolRed rna-NR_132204.1_EthanolRed Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:186637-187242:+ gene-YNCL0003W_FaliES1 rna-NR_132204.1_FaliES1 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000431.1:30490-31095:+ gene-YNCL0003W_JAY291 rna-NR_132204.1_JAY291 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:194462-195067:+ gene-YNCL0003W_MUCL30387 rna-NR_132204.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:201085-201690:+ gene-YNCL0003W_MUCL30388 rna-NR_132204.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:194837-195442:+ gene-YNCL0003W_MUCL39482 rna-NR_132204.1_MUCL39482 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:194738-195343:+ gene-YNCL0003W_MUCL42920 rna-NR_132204.1_MUCL42920 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:198758-199363:+ gene-YNCL0003W_NCIM3186 rna-NR_132204.1_NCIM3186 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:186895-187500:+ gene-YNCL0003W_NCYC1407 rna-NR_132204.1_NCYC1407 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:192773-193378:+ gene-YNCL0003W_PE2H3 rna-NR_132204.1_PE2H3 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:192514-193119:+ gene-YNCL0003W_PE2H4 rna-NR_132204.1_PE2H4 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:198784-199389:+ gene-YNCL0003W_S288C rna-NR_132204.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000046.1:30627-31232:+ gene-YNCL0003W_SA1 rna-NR_132204.1_SA1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:186803-187408:+ gene-YNCL0003W_ThermosaccDry rna-NR_132204.1_ThermosaccDry Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:200222-200827:+ gene-YNCL0003W_VR1 rna-NR_132204.1_VR1 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:186165-186770:+ gene-YNCL0003W_ZTW1 rna-NR_132204.1_ZTW1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:194931-195537:+ gene-YNCL0003W_Sparadoxus rna-NR_132204.1_Sparadoxus Unknown 95.2 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files