SNR3 (YNCJ0030W)

Gene profile

Gene name: SNR3
Reference locus (S288C): YNCJ0030W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:635248-635441:+ gene-YNCJ0030W_AKU4011 rna-NR_132198.1_AKU4011 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000076.1:38161-38354:- gene-YNCJ0030W_BG1 rna-NR_132198.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:650965-651158:+ gene-YNCJ0030W_Bruggeman rna-NR_132198.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:655619-655812:+ gene-YNCJ0030W_CAT1 rna-NR_132198.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:647289-647482:+ gene-YNCJ0030W_CBS1585 rna-NR_132198.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:666162-666355:+ gene-YNCJ0030W_CBS436 rna-NR_132198.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:634066-634259:+ gene-YNCJ0030W_CBS6412 rna-NR_132198.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:636721-636914:+ gene-YNCJ0030W_CBS6413 rna-NR_132198.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:646109-646302:+ gene-YNCJ0030W_CENPK1137D rna-NR_132198.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:639666-639859:+ gene-YNCJ0030W_EthanolRed rna-NR_132198.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:651129-651322:+ gene-YNCJ0030W_FaliES1 rna-NR_132198.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000054.1:37833-38026:- gene-YNCJ0030W_JAY291 rna-NR_132198.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:649760-649953:+ gene-YNCJ0030W_MUCL30387 rna-NR_132198.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:647485-647678:+ gene-YNCJ0030W_MUCL30388 rna-NR_132198.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:640772-640965:+ gene-YNCJ0030W_MUCL39482 rna-NR_132198.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:645511-645704:+ gene-YNCJ0030W_MUCL42920 rna-NR_132198.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:663728-663921:+ gene-YNCJ0030W_NCIM3186 rna-NR_132198.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:638323-638516:+ gene-YNCJ0030W_NCYC1407 rna-NR_132198.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:656514-656707:+ gene-YNCJ0030W_PE2H3 rna-NR_132198.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:650203-650396:+ gene-YNCJ0030W_PE2H4 rna-NR_132198.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:663749-663942:+ gene-YNCJ0030W_S288C rna-NR_132198.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000069.1:38186-38379:- gene-YNCJ0030W_SA1 rna-NR_132198.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:645060-645253:+ gene-YNCJ0030W_ThermosaccDry rna-NR_132198.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:647437-647630:+ gene-YNCJ0030W_VR1 rna-NR_132198.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:624411-624604:+ gene-YNCJ0030W_ZTW1 rna-NR_132198.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:658629-658821:+ gene-YNCJ0030W_Sparadoxus rna-NR_132198.1_Sparadoxus Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files